RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	NPW	Q8N729	165 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	GLIS1	Q8NBF1	620 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	VN1R2	Q8NFZ6	395 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	ATL2	Q8NHH9	583 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	CCDC26	Q8TAB7	109 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	HNRNPLL	Q8WVV9	542 aa	Known RBP	9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	CASKIN2	Q8WXE0	1202 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	WBP2	Q969T9	261 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	AZIN2	Q96A70	460 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	SLC22A12	Q96S37	553 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	CDK5RAP1	Q96SZ6	601 aa	Known RBP	9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	ERP44	Q9BS26	406 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	TRIM51	Q9BSJ1	452 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	MAN1C1	Q9NR34	630 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	ZDHHC18	Q9NUE0	388 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	GRHL1	Q9NZI5	618 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	DTL	Q9NZJ0	730 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	TRPM5	Q9NZQ8	1165 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	DNMT3L	Q9UJW3	386 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	STOML2	Q9UJZ1	356 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	FAM50B	Q9Y247	325 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	HS3ST4	Q9Y661	456 aa		9.09	□□□□□ -0.95
UBA3-208	ENST00000465627	IGSF10	Q6WRI0	2623 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	C2orf16	Q68DN1	1984 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	NYNRIN	Q9P2P1	1898 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	CCDC151	A5D8V7	595 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	DRGX	A6NNA5	263 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	APOL1	O14791	398 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	MFSD11	O43934	449 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	RFPL2	O75678	378 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	STC2	O76061	302 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	HNRNPA1	P09651	372 aa	Known RBP eCLIP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	SLC2A3	P11169	496 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ZFX	P17010	805 aa	Predicted RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	PFKL	P17858	780 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ERCC2	P18074	760 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ATP5C1	P36542	298 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ARL4A	P40617	200 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	CARS	P49589	748 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	IRAK1	P51617	712 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	KPNA1	P52294	538 aa	Predicted RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	DYNLT1	P63172	113 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	DMWD	Q09019	674 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	XRCC4	Q13426	336 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	SNX1	Q13596	522 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	SMAD2	Q15796	467 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	FAM133B	Q5BKY9	247 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	MS4A13	Q5J8X5	152 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	PRSS36	Q5K4E3	855 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ZFYVE27	Q5T4F4	411 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	RHBDF2	Q6PJF5	856 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ZDHHC24	Q6UX98	284 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	SYDE1	Q6ZW31	735 aa	Predicted RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ARHGAP12	Q8IWW6	846 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	TP53INP2	Q8IXH6	220 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	AEN	Q8WTP8	325 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	HAUS1	Q96CS2	278 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	MYEOV	Q96EZ4	313 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	BTN2A3P	Q96KV6	586 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	ZNF512	Q96ME7	567 aa	Predicted RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	HINFP	Q9BQA5	517 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	NEUROG2	Q9H2A3	272 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	EPB41L5	Q9HCM4	733 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	PPARGC1A	Q9UBK2	798 aa	Known RBP	9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	HCFC2	Q9Y5Z7	792 aa		9.08	□□□□□ -0.96
UBA3-208	ENST00000465627	NUP205	Q92621	2012 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	ZNF462	Q96JM2	2506 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	SLC12A8	A0AV02	714 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	ESYT3	A0FGR9	886 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	BCLAF3	A2AJT9	711 aa	Known RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627		E9PAM4	449 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	EEF2K	O00418	725 aa	Known RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	CREB3	O43889	395 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	LRG1	P02750	347 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	RBP3	P10745	1247 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	GABRR2	P28476	465 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	LTBR	P36941	435 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	RPL21	P46778	160 aa	Known RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	GDF10	P55107	478 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	TPI1	P60174	286 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	EIF3E	P60228	445 aa	Known RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	SLC7A9	P82251	487 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	GUCY2D	Q02846	1103 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	MTA1	Q13330	715 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	AUH	Q13825	339 aa	Known RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	BRD3	Q15059	726 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	PRKD1	Q15139	912 aa	Predicted RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	PABPC1L	Q4VXU2	614 aa	Known RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	PPM1L	Q5SGD2	360 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	BEND6	Q5SZJ8	279 aa	Predicted RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	ACBD5	Q5T8D3	534 aa	Predicted RBP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	RNF43	Q68DV7	783 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	TMEM184A	Q6ZMB5	413 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	TADA2B	Q86TJ2	420 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	DDX42	Q86XP3	938 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	MIB1	Q86YT6	1006 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	UNC45B	Q8IWX7	931 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	FAM217A	Q8IXS0	508 aa		9.07	□□□□□ -0.96
UBA3-208	ENST00000465627	CCDC105	Q8IYK2	499 aa		9.07	□□□□□ -0.96

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