RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 CAMKK1Q8N5S9 505 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 TSTD1Q8NFU3 115 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 SLC35G2Q8TBE7 412 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 NELL1Q92832 810 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 TBC1D31Q96DN5 1066 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 ALG14Q96F25 216 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 GABRG3Q99928 467 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 NCAPGQ9BPX3 1015 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 FEM1AQ9BSK4 669 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 SNRNP25Q9BV90 132 aaKnown RBP12.73□□□□□ -0.37
CHPF2-202ENST00000465601 DHX35Q9H5Z1 703 aaKnown RBP12.73□□□□□ -0.37
CHPF2-202ENST00000465601 OSGEPQ9NPF4 335 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 ZSCAN32Q9NX65 697 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 ZNF212Q9UDV6 495 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 USP18Q9UMW8 372 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 AP4E1Q9UPM8 1137 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 TBC1D30Q9Y2I9 924 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 PCDHA13Q9Y5I0 950 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 EPN1Q9Y6I3 576 aaPredicted RBP12.73□□□□□ -0.37
CHPF2-202ENST00000465601 R4GN57 208 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 NUMA1Q14980 2115 aa12.73□□□□□ -0.37
CHPF2-202ENST00000465601 A0A1W2PQF6 199 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 TMEM110-MUSTN1A8MSY1 372 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 NPC1O15118 1278 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 LCA5LO95447 670 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 HLA-EP13747 358 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 RHOQP17081 205 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 PRKCHP24723 683 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 IL1R2P27930 398 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 HOXA6P31267 233 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 SSR1P43307 286 aaKnown RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ECT2LQ008S8 904 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 NHLH1Q02575 133 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ENPP2Q13822 863 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 E2F5Q15329 346 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 SPA17Q15506 151 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ANO7Q6IWH7 933 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 SERPINA13PQ6UXR4 307 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 RAD9BQ6WBX8 426 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 SETD3Q86TU7 594 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ZNF366Q8N895 744 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 NIPA2Q8N8Q9 360 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ATRIPQ8WXE1 791 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 PPP1R9BQ96SB3 815 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 KCTD15Q96SI1 283 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 EPAS1Q99814 870 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 BAG1Q99933 345 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 FAM126AQ9BYI3 521 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 MUC3BQ9H195 1237 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ZWILCHQ9H900 591 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 GRPEL1Q9HAV7 217 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 POLMQ9NP87 494 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 NDFIP2Q9NV92 336 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 INTUQ9ULD6 942 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 TFR2Q9UP52 801 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 NEU3Q9UQ49 428 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ERVW-1Q9UQF0 538 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 ARIH1Q9Y4X5 557 aaPredicted RBP12.72□□□□□ -0.37
CHPF2-202ENST00000465601 OR51B4Q9Y5P0 310 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 DMDP11532 3685 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 OTOGLQ3ZCN5 2332 aa12.72□□□□□ -0.37
CHPF2-202ENST00000465601 THADAQ6YHU6 1953 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 A0A0D9SEW6 157 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 TCRBV21S2A2A0A5A6 115 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 GOLGA6L3A6NEY3 463 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 GOLGA6L6A8MZA4 724 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 EIF3CLB5ME19 914 aaKnown RBP12.71□□□□□ -0.37
CHPF2-202ENST00000465601 AXIN1O15169 862 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 ALDH1A2O94788 518 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 PROSCO94903 275 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 NDUFA10O95299 355 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 ASLP04424 464 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 EPHX1P07099 455 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 EPHB2P29323 1055 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 SEMA3BQ13214 749 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 MESDQ14696 234 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 SMTNL2Q2TAL5 461 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 BOLA3Q53S33 107 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 PPP6R3Q5H9R7 873 aaPredicted RBP12.71□□□□□ -0.37
CHPF2-202ENST00000465601 KCNT1Q5JUK3 1230 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 C6orf118Q5T5N4 469 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 TXNRD3NBQ6F5E7 133 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 WDR5BQ86VZ2 330 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 NLRP14Q86W24 1093 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 LONP2Q86WA8 852 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 TMEM139Q8IV31 216 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 ZBTB44Q8NCP5 570 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 OR7D4Q8NG98 312 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 HMGB4Q8WW32 186 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 RFFLQ8WZ73 363 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 MYO19Q96H55 970 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 RPL10LQ96L21 214 aaKnown RBP12.71□□□□□ -0.37
CHPF2-202ENST00000465601 MRGPRX3Q96LB0 322 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 PHOX2BQ99453 314 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 EIF3CQ99613 913 aaKnown RBP12.71□□□□□ -0.37
CHPF2-202ENST00000465601 SPON2Q9BUD6 331 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 TMEM245Q9H330 911 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 MTG2Q9H4K7 406 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 TMEM248Q9NWD8 314 aa12.71□□□□□ -0.37
CHPF2-202ENST00000465601 EBF1Q9UH73 591 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms