RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 PACS2Q86VP3 889 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MICAL1Q8TDZ2 1067 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MZB1Q8WU39 189 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 DCAKDQ8WVC6 231 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 RNF34Q969K3 372 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 QKIQ96PU8 341 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 UBE2OQ9C0C9 1292 aaKnown RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 TKTL2Q9H0I9 626 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 KDM4CQ9H3R0 1056 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ETNK2Q9NVF9 386 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 SMG5Q9UPR3 1016 aaKnown RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MFHAS1Q9Y4C4 1052 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 CHD9Q3L8U1 2897 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 C2orf71A6NGG8 1288 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 I6L893 689 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 TYROBPO43914 113 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 AVILO75366 819 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ZFXP17010 805 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MAGEA6P43360 314 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 IL9RQ01113 521 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 SCAPQ12770 1279 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 XRCC4Q13426 336 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 TAF12Q16514 161 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 TTC31Q49AM3 519 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 SLC45A4Q5BKX6 768 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 NCBP2-AS2Q69YL0 99 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 CGB2Q6NT52 195 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 LILRA6Q6PI73 481 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 CCDC110Q8TBZ0 833 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 MYRFLQ96LU7 910 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 ZNF512Q96ME7 567 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 SERPINB11Q96P15 392 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 USP15Q9Y4E8 981 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-205ENST00000464187 PCDHA11Q9Y5I1 949 aa14.92□□□□□ -0.02
COL5A1-205ENST00000464187 PLXNA4Q9HCM2 1894 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 GRM6O15303 877 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 TBX18O95935 607 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 GOT1P17174 413 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 RPA3P35244 121 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-205ENST00000464187 PBX2P40425 430 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 EPHB3P54753 998 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 CAMK1Q14012 370 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 MSANTD2Q6P1R3 559 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 KLC2Q9H0B6 622 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 ETNK1Q9HBU6 452 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 GRID1Q9ULK0 1009 aa14.91□□□□□ -0.02
COL5A1-205ENST00000464187 YBX2Q9Y2T7 364 aaKnown RBP14.91□□□□□ -0.02
COL5A1-205ENST00000464187 PLXNA3P51805 1871 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 TCRBV9S1A1TA0A576 114 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 TLR5O60602 858 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 AMPD1P23109 780 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 CCR1P32246 355 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 IRS1P35568 1242 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 ARL4AP40617 200 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 MSH2P43246 934 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 SCTRP47872 440 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 NR2C2P49116 596 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 EFEMP1Q12805 493 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 SLC1A5Q15758 541 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 C10orf120Q5SQS8 335 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 DNAJB7Q7Z6W7 309 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-205ENST00000464187 CAND1Q86VP6 1230 aaKnown RBP14.9□□□□□ -0.02
COL5A1-205ENST00000464187 CNPY4Q8N129 248 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 CCDC33Q8N5R6 958 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 PDZD8Q8NEN9 1154 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 OVCA2Q8WZ82 227 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 PSMG2Q969U7 264 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 CYTH2Q99418 400 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 GDF15Q99988 308 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 PAIP2Q9BPZ3 127 aaKnown RBP14.9□□□□□ -0.02
COL5A1-205ENST00000464187 FRMD8Q9BZ67 464 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-205ENST00000464187 CCSER2Q9H7U1 834 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 SSU72Q9NP77 194 aaKnown RBP14.9□□□□□ -0.02
COL5A1-205ENST00000464187 OLA1Q9NTK5 396 aaKnown RBP14.9□□□□□ -0.02
COL5A1-205ENST00000464187 DTLQ9NZJ0 730 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 MYO16Q9Y6X6 1858 aa14.9□□□□□ -0.02
COL5A1-205ENST00000464187 ZNF840PA6NDX5 716 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 CREB3O43889 395 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 GCATO75600 419 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 METTL18O95568 372 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 GLUD1P00367 558 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 KRT4P19013 534 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 CA4P22748 312 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 ERVK-21P61565 698 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 PLD1Q13393 1074 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 SPARCL1Q14515 664 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 BRMS1LQ5PSV4 323 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 SNX30Q5VWJ9 437 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 FBXW10Q5XX13 1052 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 TRPM8Q7Z2W7 1104 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 SPATA21Q7Z572 469 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 CFAP36Q96G28 342 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 TRMT2BQ96GJ1 504 aaKnown RBP14.89□□□□□ -0.03
COL5A1-205ENST00000464187 SAMD11Q96NU1 681 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 OLFM3Q96PB7 478 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 PBX4Q9BYU1 374 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 ABCF3Q9NUQ8 709 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 ARHGEF38Q9NXL2 777 aa14.89□□□□□ -0.03
COL5A1-205ENST00000464187 RCOR3Q9P2K3 495 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms