RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 PDILTQ8N807 584 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 FSIP1Q8NA03 581 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 TDRD5Q8NAT2 981 aaKnown RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 SEPT1Q8WYJ6 367 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 STAMQ92783 540 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF396Q96N95 335 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 TTC1Q99614 292 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF577Q9BSK1 485 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 ELAC1Q9H777 363 aaKnown RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 TTC12Q9H892 705 aaPredicted RBP3.96□□□□□ -1.78
SCFD1-204ENST00000463622 POLD4Q9HCU8 107 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 C1orf112Q9NSG2 853 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 BLOC1S4Q9NUP1 217 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 IGSF9Q9P2J2 1179 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 TUBE1Q9UJT0 475 aa3.96□□□□□ -1.78
SCFD1-204ENST00000463622 CENPVL1A0A0U1RR11 272 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 FAM237AA0A1B0GTK4 181 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TBKBP1A7MCY6 615 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 IPO5O00410 1097 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 NDUFA10O95299 355 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 WEE2P0C1S8 567 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 GCFC2P16383 781 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 WNT3AP56704 352 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 NANOS3P60323 173 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 KRT17Q04695 432 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TRAF1Q13077 416 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 CTTNQ14247 550 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 DHCR24Q15392 516 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ZNF528Q3MIS6 628 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 LONRF3Q496Y0 759 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TMEM119Q4V9L6 283 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 LY6G5CQ5SRR4 150 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PRAMEF14Q5SWL7 426 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 LRCH2Q5VUJ6 765 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PLPP4Q5VZY2 271 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 DOK3Q7L591 496 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 NIPA1Q7RTP0 329 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 GPRIN1Q7Z2K8 1008 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TRMT1LQ7Z2T5 733 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 GPR149Q86SP6 731 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 CATSPER3Q86XQ3 398 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 CCDC60Q8IWA6 550 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SLC44A3Q8N4M1 653 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 C12orf76Q8N812 135 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SLC35B2Q8TB61 432 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 NELL1Q92832 810 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 CASD1Q96PB1 797 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 RTKNQ9BST9 563 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TMEM117Q9H0C3 514 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 QRSL1Q9H0R6 528 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 GLT8D2Q9H1C3 349 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SMARCAD1Q9H4L7 1026 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TMEM161AQ9NX61 479 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ERAP1Q9NZ08 941 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SPG21Q9NZD8 308 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TRPV2Q9Y5S1 764 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 MORC2Q9Y6X9 1032 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 KIAA1217Q5T5P2 1943 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 MYO10Q9HD67 2058 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SMIM35A0A1B0GVV1 85 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TMEM191CA6NGB0 347 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 E9PMD0 336 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TRIM24O15164 1050 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SLITRK3O94933 977 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 CXCL14O95715 111 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 GLULP15104 373 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PROZP22891 400 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PPM1AP35813 382 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TCF7P36402 384 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PRPHP41219 470 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SCAND1P57086 179 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ACTR2P61160 394 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SETQ01105 290 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PPP2R5CQ13362 524 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SMC1AQ14683 1233 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ZRSR1Q15695 479 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 RARS2Q5T160 578 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SPOUT1Q5T280 376 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ARL6IP4Q66PJ3 421 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 PLA2G4FQ68DD2 849 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ADALQ6DHV7 355 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 LHFPL2Q6ZUX7 228 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 GDF7Q7Z4P5 450 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 NOP9Q86U38 636 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 KIAA0319LQ8IZA0 1049 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 SLC39A11Q8N1S5 342 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 OR10H5Q8NGA6 315 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 RSAD2Q8WXG1 361 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 RIN2Q8WYP3 895 aaPredicted RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 DHX58Q96C10 678 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ADAM2Q99965 735 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 HSD17B14Q9BPX1 270 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 EIF2AK1Q9BQI3 630 aaKnown RBP3.95□□□□□ -1.78
SCFD1-204ENST00000463622 TEKT3Q9BXF9 490 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 FGFBP2Q9BYJ0 223 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 RHOBTB2Q9BYZ6 727 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ATP6V0A4Q9HBG4 840 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 ENTPD7Q9NQZ7 604 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 DACT1Q9NYF0 836 aa3.95□□□□□ -1.78
SCFD1-204ENST00000463622 CFAP45Q9UL16 551 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 239.3 ms