RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 PCDHGB2Q9Y5G2 931 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 OR51B4Q9Y5P0 310 aa21.17■□□□□ 0.98
PDLIM4-205ENST00000463615 KNL1Q8NG31 2342 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 F8VZ95 297 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 CBFA2T3O75081 653 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 IGHV4-34P06331 123 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 PDGFRAP16234 1089 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 MZF1P28698 734 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 NNMTP40261 264 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 SIM1P81133 766 aaPredicted RBP21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 NME3Q13232 169 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 ELAVL3Q14576 367 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 BNIPLQ7Z465 357 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 ERICH1Q86X53 443 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 ZNF677Q86XU0 584 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 XYLT1Q86Y38 959 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 C1orf74Q96LT6 269 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 FEM1AQ9BSK4 669 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 GAREM1Q9H706 876 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 TM9SF3Q9HD45 589 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 SERGEFQ9UGK8 458 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 TPX2Q9ULW0 747 aaKnown RBP21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 PAXBP1Q9Y5B6 917 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 SLCO1B1Q9Y6L6 691 aa21.16■□□□□ 0.98
PDLIM4-205ENST00000463615 SYNJ2BP-COX16A0A087WUM0 186 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 SPAARA0A1B0GVQ0 90 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 FAM221BA6H8Z2 402 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 MID1O15344 667 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 ATP9BO43861 1147 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 SH3BP5O60239 455 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 ADH1BP00325 375 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 PROS1P07225 676 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 C5AR1P21730 350 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 SLC8A1P32418 973 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 GALCP54803 685 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 CDH4P55283 916 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 FAM193AP78312 1265 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 TEAD4Q15561 434 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 ZNF423Q2M1K9 1284 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 HLA-BQ31612 363 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 SLC25A52Q3SY17 297 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 KIAA0895LQ68EN5 471 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 GLRX5Q86SX6 157 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 NOP9Q86U38 636 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 CIR1Q86X95 450 aaPredicted RBP21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 MMAAQ8IVH4 418 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 NAXDQ8IW45 347 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 ZNF683Q8IZ20 524 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 EPS8L1Q8TE68 723 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 RPL10LQ96L21 214 aaKnown RBP21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 SCNM1Q9BWG6 230 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 GANQ9H2C0 597 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 PDCL3Q9H2J4 239 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 WDCPQ9H6R7 721 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 COX16Q9P0S2 106 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 VANGL2Q9ULK5 521 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 NEUROG3Q9Y4Z2 214 aa21.15■□□□□ 0.98
PDLIM4-205ENST00000463615 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 A0A1B0GVT2 93 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 I6L893 689 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 ADCY5O95622 1261 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 GOT1P17174 413 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 CSNK1EP49674 416 aaKnown RBP21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 STK19P49842 368 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 IRAK1P51617 712 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 NOMO3P69849 1222 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 CENPCQ03188 943 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 ZNF177Q13360 481 aaPredicted RBP21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 C14orf80Q86SX3 495 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 STK40Q8N2I9 435 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 MSANTD4Q8NCY6 345 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 OR52K2Q8NGK3 314 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 OR2T34Q8NGX1 318 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 SNX19Q92543 992 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 SPAG5Q96R06 1193 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 TKTL2Q9H0I9 626 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 NEUROG2Q9H2A3 272 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 IL21RQ9HBE5 538 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 ANLNQ9NQW6 1124 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 TAB2Q9NYJ8 693 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 TMEM59LQ9UK28 342 aa21.14■□□□□ 0.97
PDLIM4-205ENST00000463615 A0A1W2PP55 124 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 A0A1W2PPC4 97 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 LRRC72A6NJI9 287 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 DRGXA6NNA5 263 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 PES1O00541 588 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 FSBPO95073 299 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 TOP3BO95985 862 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 TFE3P19532 575 aaPredicted RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 RDXP35241 583 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 CCR5P51681 352 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 RACK1P63244 317 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 KRT31Q15323 416 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 TRIP6Q15654 476 aaKnown RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 KIF19Q2TAC6 998 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 FAM102AQ5T9C2 384 aaPredicted RBP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 UNQ6494/PRO21346Q6UXR6 183 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 SND1Q7KZF4 910 aaKnown RBP eCLIP21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 AADATQ8N5Z0 425 aa21.13■□□□□ 0.97
PDLIM4-205ENST00000463615 BAHD1Q8TBE0 780 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms