RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SDE2Q6IQ49 451 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 SCYL2Q6P3W7 929 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 SETD3Q86TU7 594 aaPredicted RBP18.19■□□□□ 0.5
VPS52-214ENST00000463486 KDM1BQ8NB78 822 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 GAB3Q8WWW8 586 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 NKD2Q969F2 451 aaPredicted RBP18.19■□□□□ 0.5
VPS52-214ENST00000463486 ERLEC1Q96DZ1 483 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 PSMB7Q99436 277 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 TPSD1Q9BZJ3 242 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 ZYG11BQ9C0D3 744 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 MKRN2Q9H000 416 aaKnown RBP18.19■□□□□ 0.5
VPS52-214ENST00000463486 SLC6A17Q9H1V8 727 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 NDFIP2Q9NV92 336 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 SLCO3A1Q9UIG8 710 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 PLA2G4CQ9UP65 541 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 ERVW-1Q9UQF0 538 aa18.19■□□□□ 0.5
VPS52-214ENST00000463486 SDK1Q7Z5N4 2213 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 A0A0D9SEW6 157 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 DCLK1O15075 740 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 ASLP04424 464 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 TCF4P15884 667 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 NDUFV2P19404 249 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 FECHP22830 423 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 MIPP30301 263 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 NUMBP49757 651 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 VASPP50552 380 aaPredicted RBP18.18■□□□□ 0.5
VPS52-214ENST00000463486 AIF1P55008 147 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 OXCT1P55809 520 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 CA9Q16790 459 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 TSR1Q2NL82 804 aaKnown RBP18.18■□□□□ 0.5
VPS52-214ENST00000463486 MAP7D1Q3KQU3 841 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 DAB2IPQ5VWQ8 1189 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 RNF219Q5W0B1 726 aaPredicted RBP18.18■□□□□ 0.5
VPS52-214ENST00000463486 TFAP2DQ7Z6R9 452 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 CCDC117Q8IWD4 279 aaPredicted RBP18.18■□□□□ 0.5
VPS52-214ENST00000463486 ZNF366Q8N895 744 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 NIPA2Q8N8Q9 360 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 HMGB4Q8WW32 186 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 BTBD6Q96KE9 485 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 MRGPRX1Q96LB2 322 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 NUP85Q9BW27 656 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 MTG2Q9H4K7 406 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 SPTLC3Q9NUV7 552 aa18.18■□□□□ 0.5
VPS52-214ENST00000463486 AKR1B10O60218 316 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 ALDH1A2O94788 518 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 LMNAP02545 664 aaKnown RBP18.17■□□□□ 0.5
VPS52-214ENST00000463486 EPHX1P07099 455 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 SRPRAP08240 638 aaKnown RBP18.17■□□□□ 0.5
VPS52-214ENST00000463486 RHOQP17081 205 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 IL1R2P27930 398 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 PCK1P35558 622 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 P2RY2P41231 377 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 STK19P49842 368 aaPredicted RBP18.17■□□□□ 0.5
VPS52-214ENST00000463486 MRE11P49959 708 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 ECT2LQ008S8 904 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 E2F5Q15329 346 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 SERPINA13PQ6UXR4 307 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 FRMD1Q8N878 549 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 CCDC42Q96M95 316 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 RETREG1Q9H6L5 497 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 PRSS16Q9NQE7 514 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 TMEM248Q9NWD8 314 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 PCSK1NQ9UHG2 260 aa18.17■□□□□ 0.5
VPS52-214ENST00000463486 ILVBLA1L0T0 632 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 TTC34A8MYJ7 566 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 RPP40O75818 363 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 ZMPSTE24O75844 475 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 MOCS3O95396 460 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 H2AFZP0C0S5 128 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 TMEM253P0C7T8 217 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 OR1E1P30953 314 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 HOXD11P31277 338 aaPredicted RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 ACAP1Q15027 740 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 HNRNPA1L2Q32P51 320 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 FNDC3BQ53EP0 1204 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 EFHC2Q5JST6 749 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 H2AFVQ71UI9 128 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 CPNE8Q86YQ8 564 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 FRS2Q8WU20 508 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 RLN3Q8WXF3 142 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 ZC3H10Q96K80 434 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 RPL10LQ96L21 214 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 ANP32EQ9BTT0 268 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 NOL6Q9H6R4 1146 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 GPATCH2LQ9NWQ4 482 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 MBD1Q9UIS9 605 aaPredicted RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 SMG5Q9UPR3 1016 aaKnown RBP18.16■□□□□ 0.5
VPS52-214ENST00000463486 INVSQ9Y283 1065 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 CHD5Q8TDI0 1954 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 ABCA7Q8IZY2 2146 aa18.16■□□□□ 0.5
VPS52-214ENST00000463486 CFAP54Q96N23 3096 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 SNAP91O60641 907 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 RNF8O76064 485 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 LCA5LO95447 670 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 MT-CO1P00395 513 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 RHOCP08134 193 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 SULT2A1Q06520 285 aa18.15■□□□□ 0.5
VPS52-214ENST00000463486 SIM2Q14190 667 aaPredicted RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 PIGHQ14442 188 aaPredicted RBP18.15■□□□□ 0.5
VPS52-214ENST00000463486 C6orf118Q5T5N4 469 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms