RNA–Protein interactions for RNA: ENST00000463094.5

MSH5-210, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-210ENST00000463094 ARID5BQ14865 1188 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 TEAD4Q15561 434 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 CST6Q15828 149 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 ARL13BQ3SXY8 428 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 FILIP1LQ4L180 1135 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 C2CD6Q53TS8 623 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 N4BP2L1Q5TBK1 243 aaPredicted RBP20.48■□□□□ 0.87
MSH5-210ENST00000463094 MMAAQ8IVH4 418 aaKnown RBP20.48■□□□□ 0.87
MSH5-210ENST00000463094 SLC20A1Q8WUM9 679 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 IGSF8Q969P0 613 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 MRGPRX3Q96LB0 322 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 PABPC3Q9H361 631 aaKnown RBP20.48■□□□□ 0.87
MSH5-210ENST00000463094 MTG2Q9H4K7 406 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 ARHGEF38Q9NXL2 777 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 NOCTQ9UK39 431 aaKnown RBP20.48■□□□□ 0.87
MSH5-210ENST00000463094 SIK3Q9Y2K2 1263 aa20.48■□□□□ 0.87
MSH5-210ENST00000463094 ANKRD62A6NC57 917 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 FAM47DPA6NHR8 397 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 LRRC72A6NJI9 287 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 RNASEH2AO75792 299 aaKnown RBP20.47■□□□□ 0.87
MSH5-210ENST00000463094 FSBPO95073 299 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 ADCY5O95622 1261 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 ADH1BP00325 375 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 RHOCP08134 193 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 DESP17661 470 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 MZF1P28698 734 aaPredicted RBP20.47■□□□□ 0.87
MSH5-210ENST00000463094 SDC4P31431 198 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 GGCXP38435 758 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 PSMD8P48556 350 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 PLK1P53350 603 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 JAM2P57087 298 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 ELAVL3Q14576 367 aaKnown RBP20.47■□□□□ 0.87
MSH5-210ENST00000463094 IL27RAQ6UWB1 636 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 MYO19Q96H55 970 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 CCDC114Q96M63 670 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 CFAP57Q96MR6 1250 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 C2orf49Q9BVC5 232 aaPredicted RBP20.47■□□□□ 0.87
MSH5-210ENST00000463094 METTL5Q9NRN9 209 aaKnown RBP20.47■□□□□ 0.87
MSH5-210ENST00000463094 SLCO3A1Q9UIG8 710 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 FARP1Q9Y4F1 1045 aaPredicted RBP20.47■□□□□ 0.87
MSH5-210ENST00000463094 ITIH6Q6UXX5 1313 aa20.47■□□□□ 0.87
MSH5-210ENST00000463094 IL1BP01584 269 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 MMP8P22894 467 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 SLC8A1P32418 973 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 FLT3P36888 993 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 NUMBP49757 651 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 STK19P49842 368 aaPredicted RBP20.46■□□□□ 0.87
MSH5-210ENST00000463094 AFF3P51826 1226 aaKnown RBP20.46■□□□□ 0.87
MSH5-210ENST00000463094 ATP11AP98196 1134 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 ZNF252P-AS1Q0IIN9 211 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 ANO6Q4KMQ2 910 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 C6orf118Q5T5N4 469 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 C9orf64Q5T6V5 341 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 CXorf57Q6NSI4 855 aaKnown RBP20.46■□□□□ 0.87
MSH5-210ENST00000463094 ARCQ7LC44 396 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 ADAT2Q7Z6V5 191 aaKnown RBP20.46■□□□□ 0.87
MSH5-210ENST00000463094 DEFB124Q8NES8 71 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 OR8D1Q8WZ84 308 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 NT5C3BQ969T7 300 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 C1orf74Q96LT6 269 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 C11orf70Q9BRQ4 267 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 FEM1AQ9BSK4 669 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 C6orf106Q9H6K1 298 aaPredicted RBP20.46■□□□□ 0.87
MSH5-210ENST00000463094 ANGPTL2Q9UKU9 493 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 CKAP5Q14008 2032 aa20.46■□□□□ 0.87
MSH5-210ENST00000463094 EPHB6O15197 1021 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 MID1O15344 667 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 SRGAP2O75044 1071 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 CER1O95813 267 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 CYP1A1P04798 512 aaPredicted RBP20.45■□□□□ 0.86
MSH5-210ENST00000463094 CALB1P05937 261 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 TFE3P19532 575 aaPredicted RBP20.45■□□□□ 0.86
MSH5-210ENST00000463094 C5AR1P21730 350 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 FMO1Q01740 532 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 GRIK2Q13002 908 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 SLC14A1Q13336 389 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 FAM46CQ5VWP2 391 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 CAVIN1Q6NZI2 390 aaKnown RBP20.45■□□□□ 0.86
MSH5-210ENST00000463094 SETD3Q86TU7 594 aaPredicted RBP20.45■□□□□ 0.86
MSH5-210ENST00000463094 STK40Q8N2I9 435 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 SLC30A5Q8TAD4 765 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 SKA1Q96BD8 255 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 ERGIC2Q96RQ1 377 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 HAPLN3Q96S86 360 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 SELENOOQ9BVL4 669 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 ADAM22Q9P0K1 906 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 TMEM59LQ9UK28 342 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 FZD4Q9ULV1 537 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.45■□□□□ 0.86
MSH5-210ENST00000463094 PCDHB9Q9Y5E1 797 aa20.45■□□□□ 0.86
MSH5-210ENST00000463094 TNRC6BQ9UPQ9 1833 aaKnown RBP20.45■□□□□ 0.86
MSH5-210ENST00000463094 A0A1W2PP55 124 aa20.44■□□□□ 0.86
MSH5-210ENST00000463094 LRRC10BA6NIK2 292 aa20.44■□□□□ 0.86
MSH5-210ENST00000463094 C1QTNF3-AMACRE9PGA6 284 aa20.44■□□□□ 0.86
MSH5-210ENST00000463094 OR1E1P30953 314 aa20.44■□□□□ 0.86
MSH5-210ENST00000463094 TPM4P67936 248 aa20.44■□□□□ 0.86
MSH5-210ENST00000463094 HNRNPDQ14103 355 aaKnown RBP20.44■□□□□ 0.86
MSH5-210ENST00000463094 CDO1Q16878 200 aa20.44■□□□□ 0.86
MSH5-210ENST00000463094 OTUD1Q5VV17 481 aaPredicted RBP20.44■□□□□ 0.86
MSH5-210ENST00000463094 C14orf80Q86SX3 495 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms