RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 STX1AQ16623 288 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 C9orf64Q5T6V5 341 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 OTUD1Q5VV17 481 aaPredicted RBP14.37□□□□□ -0.11
USP4-206ENST00000461553 CDKAL1Q5VV42 579 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 CXorf57Q6NSI4 855 aaKnown RBP14.37□□□□□ -0.11
USP4-206ENST00000461553 SASS6Q6UVJ0 657 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 RBM43Q6ZSC3 357 aaKnown RBP14.37□□□□□ -0.11
USP4-206ENST00000461553 NOP9Q86U38 636 aaKnown RBP14.37□□□□□ -0.11
USP4-206ENST00000461553 XYLT1Q86Y38 959 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 MMAAQ8IVH4 418 aaKnown RBP14.37□□□□□ -0.11
USP4-206ENST00000461553 ANKRD20A12PQ8NF67 263 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 GPT2Q8TD30 523 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 RPL10LQ96L21 214 aaKnown RBP14.37□□□□□ -0.11
USP4-206ENST00000461553 NPY6RQ99463 290 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 TKTL2Q9H0I9 626 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 VPS16Q9H269 839 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 GANQ9H2C0 597 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 PIGVQ9NUD9 493 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 TMEM51Q9NW97 253 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 FBXL12Q9NXK8 326 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 DAAM1Q9Y4D1 1078 aa14.37□□□□□ -0.11
USP4-206ENST00000461553 CHD5Q8TDI0 1954 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.36□□□□□ -0.11
USP4-206ENST00000461553 SPAARA0A1B0GVQ0 90 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 A0A1W2PP55 124 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 FAM170AA1A519 330 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 FAM47DPA6NHR8 397 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 CLDN11O75508 207 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 GJB3O75712 270 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 RNASEH2AO75792 299 aaKnown RBP14.36□□□□□ -0.11
USP4-206ENST00000461553 F9P00740 461 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 MMEP08473 750 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 CD59P13987 128 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 MZF1P28698 734 aaPredicted RBP14.36□□□□□ -0.11
USP4-206ENST00000461553 GABRB2P47870 512 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 GRIA4P48058 902 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 PLK1P53350 603 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 NOMO3P69849 1222 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 DEUP1Q05D60 604 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 ZNF177Q13360 481 aaPredicted RBP14.36□□□□□ -0.11
USP4-206ENST00000461553 ST3GAL2Q16842 350 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 NAA35Q5VZE5 725 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 KIAA0895LQ68EN5 471 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 ADAT2Q7Z6V5 191 aaKnown RBP14.36□□□□□ -0.11
USP4-206ENST00000461553 ZNF677Q86XU0 584 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 NAXDQ8IW45 347 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 IGSF8Q969P0 613 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 SPAG5Q96R06 1193 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 OMDQ99983 421 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 SIK2Q9H0K1 926 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 MUC3BQ9H195 1237 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 WDCPQ9H6R7 721 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 GAREM1Q9H706 876 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 FAM207AQ9NSI2 230 aaPredicted RBP14.36□□□□□ -0.11
USP4-206ENST00000461553 ANO10Q9NW15 660 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 ARHGEF38Q9NXL2 777 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 SLCO3A1Q9UIG8 710 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 VPS28Q9UK41 221 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 FZD4Q9ULV1 537 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 PCDHB9Q9Y5E1 797 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 DOCK9Q9BZ29 2069 aa14.36□□□□□ -0.11
USP4-206ENST00000461553 A0A1B0GVT2 93 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 LRRC72A6NJI9 287 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 GOLGA8SH3BPF8 625 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 GFPT2O94808 682 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 ADCY5O95622 1261 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 RHOCP08134 193 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 CD27P26842 260 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 RDXP35241 583 aaKnown RBP14.35□□□□□ -0.11
USP4-206ENST00000461553 CXCR3P49682 368 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 IRAK1P51617 712 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 CDH4P55283 916 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 POLR2FP61218 127 aaKnown RBP14.35□□□□□ -0.11
USP4-206ENST00000461553 MYL5Q02045 173 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 SLC25A52Q3SY17 297 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 DSG4Q86SJ6 1040 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 STK40Q8N2I9 435 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 PGAP3Q96FM1 320 aaPredicted RBP14.35□□□□□ -0.11
USP4-206ENST00000461553 TBCBQ99426 244 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 ADAM33Q9BZ11 813 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 OSGEPQ9NPF4 335 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 SERGEFQ9UGK8 458 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 ASPMQ8IZT6 3477 aa14.35□□□□□ -0.11
USP4-206ENST00000461553 SPEGQ15772 3267 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 MBD3O95983 291 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 IL1BP01584 269 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 ZNF883P0CG24 379 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 TFE3P19532 575 aaPredicted RBP14.34□□□□□ -0.11
USP4-206ENST00000461553 C5AR1P21730 350 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 SLC8A1P32418 973 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 SOX5P35711 763 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 FLT3P36888 993 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 CSNK1EP49674 416 aaKnown RBP14.34□□□□□ -0.11
USP4-206ENST00000461553 KLK7P49862 253 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 C5orf22Q49AR2 442 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 ACCSLQ4AC99 568 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 C2CD6Q53TS8 623 aa14.34□□□□□ -0.11
USP4-206ENST00000461553 ACBD5Q5T8D3 534 aaPredicted RBP14.34□□□□□ -0.11
USP4-206ENST00000461553 NCEH1Q6PIU2 408 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms