RNA–Protein interactions for RNA: ENST00000461469.5

LMBR1-214, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-214ENST00000461469 TTC39BQ5VTQ0 682 aaPredicted RBP24.28■■□□□ 1.48
LMBR1-214ENST00000461469 ZNF776Q68DI1 518 aaPredicted RBP24.28■■□□□ 1.48
LMBR1-214ENST00000461469 PSAPL1Q6NUJ1 521 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 ZNF677Q86XU0 584 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 CCDC117Q8IWD4 279 aaPredicted RBP24.28■■□□□ 1.48
LMBR1-214ENST00000461469 ZCCHC9Q8N567 271 aaKnown RBP24.28■■□□□ 1.48
LMBR1-214ENST00000461469 KDM1BQ8NB78 822 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 C1orf216Q8TAB5 229 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 JOSD2Q8TAC2 188 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 PTPRN2Q92932 1015 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 SPAG5Q96R06 1193 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 FAM129BQ96TA1 746 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 C11orf70Q9BRQ4 267 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 GTPBP2Q9BX10 602 aaKnown RBP24.28■■□□□ 1.48
LMBR1-214ENST00000461469 WDCPQ9H6R7 721 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 RRN3Q9NYV6 651 aa24.28■■□□□ 1.48
LMBR1-214ENST00000461469 UNGP13051 313 aaPredicted RBP24.27■■□□□ 1.48
LMBR1-214ENST00000461469 STAT1P42224 750 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 BNC1Q01954 994 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 BRMS1LQ5PSV4 323 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 SH3PXD2AQ5TCZ1 1133 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 DAB2IPQ5VWQ8 1189 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 CAVIN1Q6NZI2 390 aaKnown RBP24.27■■□□□ 1.48
LMBR1-214ENST00000461469 NEK11Q8NG66 645 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 PCMTD1Q96MG8 357 aaPredicted RBP24.27■■□□□ 1.48
LMBR1-214ENST00000461469 PABPC3Q9H361 631 aaKnown RBP24.27■■□□□ 1.48
LMBR1-214ENST00000461469 FBRSQ9HAH7 460 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 EIF2B4Q9UI10 523 aaKnown RBP24.27■■□□□ 1.48
LMBR1-214ENST00000461469 PLXNA2O75051 1894 aa24.27■■□□□ 1.48
LMBR1-214ENST00000461469 ARHGAP33O14559 1287 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 MID1O15344 667 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 MOCS3O95396 460 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 CDK11BP21127 795 aaKnown RBP24.26■■□□□ 1.47
LMBR1-214ENST00000461469 NOVA1P51513 510 aaKnown RBP24.26■■□□□ 1.47
LMBR1-214ENST00000461469 METAP1P53582 386 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 GFPT1Q06210 699 aaPredicted RBP24.26■■□□□ 1.47
LMBR1-214ENST00000461469 SLC12A1Q13621 1099 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 WDR45BQ5MNZ6 344 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 SYCP2LQ5T4T6 812 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 MMAAQ8IVH4 418 aaKnown RBP24.26■■□□□ 1.47
LMBR1-214ENST00000461469 STK40Q8N2I9 435 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 FRS2Q8WU20 508 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 PSMB7Q99436 277 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 FEM1AQ9BSK4 669 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 MIR1-1HGQ9H1L0 117 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 TMEM131Q92545 1883 aa24.26■■□□□ 1.47
LMBR1-214ENST00000461469 PCNX2A6NKB5 2137 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 DNTTP04053 509 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 ZBTB16Q05516 673 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 C15orf59Q2T9L4 293 aaPredicted RBP24.25■■□□□ 1.47
LMBR1-214ENST00000461469 FAM131BQ86XD5 332 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 MINDY1Q8N5J2 469 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 ORAI3Q9BRQ5 295 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 FUCA2Q9BTY2 467 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 MAGEB5Q9BZ81 275 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 MPP6Q9NZW5 540 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 TBC1D30Q9Y2I9 924 aa24.25■■□□□ 1.47
LMBR1-214ENST00000461469 TP53BP1Q12888 1972 aaPredicted RBP24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP24.24■■□□□ 1.47
LMBR1-214ENST00000461469 EDDM13A0A1B0GTR0 161 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 TARSL2A2RTX5 802 aaKnown RBP24.24■■□□□ 1.47
LMBR1-214ENST00000461469 DRGXA6NNA5 263 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 GJB3O75712 270 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 SEMA4FO95754 770 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 CDH4P55283 916 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ATP11AP98196 1134 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 GRIK2Q13002 908 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ZNF177Q13360 481 aaPredicted RBP24.24■■□□□ 1.47
LMBR1-214ENST00000461469 CST6Q15828 149 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 CCDC14Q49A88 953 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 RNF219Q5W0B1 726 aaPredicted RBP24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ARCQ7LC44 396 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 AADATQ8N5Z0 425 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 DEFB124Q8NES8 71 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ANKRD20A12PQ8NF67 263 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 RXFP2Q8WXD0 754 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ZNF212Q9UDV6 495 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 ZBTB32Q9Y2Y4 487 aaPredicted RBP24.24■■□□□ 1.47
LMBR1-214ENST00000461469 DAAM1Q9Y4D1 1078 aa24.24■■□□□ 1.47
LMBR1-214ENST00000461469 IGLV3-10A0A075B6K4 115 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 A0A1B0GTW7 788 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 A0A1W2PP55 124 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 SNAP91O60641 907 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 CLDN11O75508 207 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 ENDOD1O94919 500 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 F9P00740 461 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 PMLP29590 882 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 RDXP35241 583 aaKnown RBP24.23■■□□□ 1.47
LMBR1-214ENST00000461469 SEMA3BQ13214 749 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 CLEC16AQ2KHT3 1053 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 RABEPKQ7Z6M1 372 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 MSANTD4Q8NCY6 345 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 BIRC7Q96CA5 298 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 BPIFA3Q9BQP9 254 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 BTBD1Q9H0C5 482 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 NEUROG2Q9H2A3 272 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 FBXL12Q9NXK8 326 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 SUSD2Q9UGT4 822 aa24.23■■□□□ 1.47
LMBR1-214ENST00000461469 DOCK9Q9BZ29 2069 aa24.22■■□□□ 1.47
LMBR1-214ENST00000461469 C2CD4BA6NLJ0 364 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms