RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 PTP4A2Q12974 167 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 ZNF177Q13360 481 aaPredicted RBP15.85■□□□□ 0.13
VARS-219ENST00000461328 C15orf59Q2T9L4 293 aaPredicted RBP15.85■□□□□ 0.13
VARS-219ENST00000461328 PPP1R2P3Q6NXS1 205 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 MON1BQ7L1V2 547 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 ARCQ7LC44 396 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 IRF2BP2Q7Z5L9 587 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 C3orf20Q8ND61 904 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 JOSD2Q8TAC2 188 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 IGSF8Q969P0 613 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 ZNF419Q96HQ0 510 aaPredicted RBP15.85■□□□□ 0.13
VARS-219ENST00000461328 NUP58Q9BVL2 599 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 PRSS16Q9NQE7 514 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 IFNKQ9P0W0 207 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 INTS6Q9UL03 887 aaKnown RBP15.85■□□□□ 0.13
VARS-219ENST00000461328 SNX10Q9Y5X0 201 aa15.85■□□□□ 0.13
VARS-219ENST00000461328 C2CD4BA6NLJ0 364 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 TM4SF5O14894 197 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 IGLV3-19P01714 112 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 DESP17661 470 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 GPD1P21695 349 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 IRAK1P51617 712 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 ATXN3P54252 364 aaPredicted RBP15.84■□□□□ 0.13
VARS-219ENST00000461328 GSCP56915 257 aaPredicted RBP15.84■□□□□ 0.13
VARS-219ENST00000461328 GFPT1Q06210 699 aaPredicted RBP15.84■□□□□ 0.13
VARS-219ENST00000461328 UAP1L1Q3KQV9 507 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 PLEKHG6Q3KR16 790 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 TDRD12Q587J7 1177 aaKnown RBP15.84■□□□□ 0.13
VARS-219ENST00000461328 WDR45BQ5MNZ6 344 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 ACAD10Q6JQN1 1059 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 C14orf80Q86SX3 495 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 FAM124AQ86V42 546 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 MCEEQ96PE7 176 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 EDEM3Q9BZQ6 932 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 HAUS4Q9H6D7 363 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 FSCN3Q9NQT6 498 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 TMPRSS4Q9NRS4 437 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 SLC6A14Q9UN76 642 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 ERVW-1Q9UQF0 538 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 CEP192Q8TEP8 1941 aa15.84■□□□□ 0.13
VARS-219ENST00000461328 LAMA1P25391 3075 aa15.83■□□□□ 0.13
VARS-219ENST00000461328 CDX4O14627 284 aaPredicted RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 CLDN11O75508 207 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 DNTTP04053 509 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 RHOCP08134 193 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 SRPRAP08240 638 aaKnown RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 SERPINF2P08697 491 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 GNSP15586 552 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 MAOBP27338 520 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 CTSOP43234 321 aaPredicted RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 CDH4P55283 916 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 RPS14P62263 151 aaKnown RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 ECT2LQ008S8 904 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 ZBTB16Q05516 673 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 SLC12A1Q13621 1099 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 HNRNPA1L2Q32P51 320 aaKnown RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 ARL13BQ3SXY8 428 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 CCDC14Q49A88 953 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 TTC31Q49AM3 519 aaPredicted RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 FIGNQ5HY92 759 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 ACBD5Q5T8D3 534 aaPredicted RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 E4F1Q66K89 784 aaPredicted RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 ZNF776Q68DI1 518 aaPredicted RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 DCUN1D2Q6PH85 259 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 LRSAM1Q6UWE0 723 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 APCDD1Q8J025 514 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 CADM4Q8NFZ8 388 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 FAM172AQ8WUF8 416 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 MYO19Q96H55 970 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 MRGPRX3Q96LB0 322 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 PPP1R9BQ96SB3 815 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 GTPBP2Q9BX10 602 aaKnown RBP15.83■□□□□ 0.12
VARS-219ENST00000461328 TTYH3Q9C0H2 523 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 MUC3BQ9H195 1237 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 MTG2Q9H4K7 406 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 ANLNQ9NQW6 1124 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 TAS2R14Q9NYV8 317 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 AIPL1Q9NZN9 384 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 SUSD2Q9UGT4 822 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 VPS28Q9UK41 221 aa15.83■□□□□ 0.12
VARS-219ENST00000461328 DNAH14Q0VDD8 3507 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 E9PAM4 449 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 SRGAP2O75044 1071 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 ADRB1P08588 477 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 SKILP12757 684 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 RRM1P23921 792 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 MZF1P28698 734 aaPredicted RBP15.82■□□□□ 0.12
VARS-219ENST00000461328 RFC1P35251 1148 aaPredicted RBP15.82■□□□□ 0.12
VARS-219ENST00000461328 NNMTP40261 264 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 PTPN9P43378 593 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 SULT2A1Q06520 285 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 NFKBIBQ15653 356 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 CXorf57Q6NSI4 855 aaKnown RBP15.82■□□□□ 0.12
VARS-219ENST00000461328 STRADAQ7RTN6 431 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 TFAP2DQ7Z6R9 452 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 MCOLN2Q8IZK6 566 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 KDM1BQ8NB78 822 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 CPLX3Q8WVH0 158 aa15.82■□□□□ 0.12
VARS-219ENST00000461328 HAPLN3Q96S86 360 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms