RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 NDRG1Q92597 394 aaKnown RBP17.82■□□□□ 0.44
TOP3A-202ENST00000461127 KLHDC7BQ96G42 594 aa17.82■□□□□ 0.44
TOP3A-202ENST00000461127 FAM129BQ96TA1 746 aa17.82■□□□□ 0.44
TOP3A-202ENST00000461127 ASCL3Q9NQ33 180 aa17.82■□□□□ 0.44
TOP3A-202ENST00000461127 CYTH4Q9UIA0 394 aa17.82■□□□□ 0.44
TOP3A-202ENST00000461127 ITIH6Q6UXX5 1313 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 PRAMEF26H0Y7S4 382 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 XPO1O14980 1071 aaKnown RBP17.81■□□□□ 0.44
TOP3A-202ENST00000461127 FFAR2O15552 330 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 GP1BAP07359 652 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 DGKAP23743 735 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 MZF1P28698 734 aaPredicted RBP17.81■□□□□ 0.44
TOP3A-202ENST00000461127 CASP1P29466 404 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 NNMTP40261 264 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 DUSP3P51452 185 aaPredicted RBP17.81■□□□□ 0.44
TOP3A-202ENST00000461127 ECT2LQ008S8 904 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 SRSF1Q07955 248 aaKnown RBP eCLIP17.81■□□□□ 0.443e-7■■■□□ 17.9
TOP3A-202ENST00000461127 ADIGQ0VDE8 80 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 ELAVL3Q14576 367 aaKnown RBP17.81■□□□□ 0.44
TOP3A-202ENST00000461127 ARHGAP17Q68EM7 881 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 SHC4Q6S5L8 630 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 IGF2-ASQ6U949 168 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 CCDC81Q6ZN84 652 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 SIX6OS1Q8N1H7 587 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 SLC4A11Q8NBS3 891 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 LMLNQ96KR4 655 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.81■□□□□ 0.44
TOP3A-202ENST00000461127 ARHGAP20Q9P2F6 1191 aa17.81■□□□□ 0.44
TOP3A-202ENST00000461127 INTS6Q9UL03 887 aaKnown RBP17.81■□□□□ 0.44
TOP3A-202ENST00000461127 GOLGA6L7A0A1B0GV03 622 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 A0A1B0GVM2 712 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 PDXKO00764 312 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 SLC7A4O43246 635 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 ACSL4O60488 711 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 SLC6A4P31645 630 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 GCLMP48507 274 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 NFATC3Q12968 1075 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 FAM133BQ5BKY9 247 aaKnown RBP17.8■□□□□ 0.44
TOP3A-202ENST00000461127 PITRM1Q5JRX3 1037 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 C1orf220Q5T0J3 134 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 BHLHA9Q7RTU4 235 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 DSG4Q86SJ6 1040 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 TRIM69Q86WT6 500 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 AZIN2Q96A70 460 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 GRAMD1AQ96CP6 724 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 FAXDC2Q96IV6 333 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 OSBPL2Q9H1P3 480 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 USP29Q9HBJ7 922 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 HESX1Q9UBX0 185 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 SSUH2Q9Y2M2 353 aa17.8■□□□□ 0.44
TOP3A-202ENST00000461127 A0A1B0GVL5 298 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 YJEFN3A6XGL0 299 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 E7ENQ6 273 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 POLR2DO15514 142 aaKnown RBP17.79■□□□□ 0.44
TOP3A-202ENST00000461127 RNGTTO60942 597 aaKnown RBP17.79■□□□□ 0.44
TOP3A-202ENST00000461127 NTRK1P04629 796 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 PFKFB1P16118 471 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 AFMP43652 599 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 RAD23BP54727 409 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 C3orf38Q5JPI3 329 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 INTS8Q75QN2 995 aaKnown RBP17.79■□□□□ 0.44
TOP3A-202ENST00000461127 PTPRN2Q92932 1015 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 SPAG5Q96R06 1193 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 GOLPH3LQ9H4A5 285 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 MMRN2Q9H8L6 949 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 CISHQ9NSE2 258 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 EXOC1Q9NV70 894 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 KLHL11Q9NVR0 708 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 SLCO3A1Q9UIG8 710 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 SATB2Q9UPW6 733 aa17.79■□□□□ 0.44
TOP3A-202ENST00000461127 COL12A1Q99715 3063 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 TDRD6O60522 2096 aaKnown RBP17.78■□□□□ 0.44
TOP3A-202ENST00000461127 NEMP2A6NFY4 417 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 MAPK13O15264 365 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 PLRG1O43660 514 aaKnown RBP17.78■□□□□ 0.44
TOP3A-202ENST00000461127 RTN2O75298 545 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 IGLV3-27P01718 113 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 THEGLP0DJG4 465 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 KRT10P13645 584 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 KRT13P13646 458 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 DRD3P35462 400 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 CTSOP43234 321 aaPredicted RBP17.78■□□□□ 0.44
TOP3A-202ENST00000461127 TBX4P57082 545 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 RPS24P62847 133 aaKnown RBP17.78■□□□□ 0.44
TOP3A-202ENST00000461127 BST2Q10589 180 aaKnown RBP17.78■□□□□ 0.44
TOP3A-202ENST00000461127 KCNMA1Q12791 1236 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 CUL4BQ13620 913 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 ISXQ2M1V0 245 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 GOLGA7BQ2TAP0 167 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 C6orf132Q5T0Z8 1188 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 FAM46CQ5VWP2 391 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 MSANTD2Q6P1R3 559 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 MAPK15Q8TD08 544 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 GPT2Q8TD30 523 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 TATDN2Q93075 761 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 APOLD1Q96LR9 279 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 SLC46A1Q96NT5 459 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 DUSP23Q9BVJ7 150 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 TRIM4Q9C037 500 aa17.78■□□□□ 0.44
TOP3A-202ENST00000461127 KCTD10Q9H3F6 313 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms