RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 TUBA3EQ6PEY2 450 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 NIPA1Q7RTP0 329 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 APBB1IPQ7Z5R6 666 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 DRC7Q8IY82 874 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 KRT78Q8N1N4 520 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 ZNF397Q8NF99 534 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 KIF18AQ8NI77 898 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 PIGOQ8TEQ8 1089 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 SEPT1Q8WYJ6 367 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 LRTOMTQ8WZ04 291 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 TNPO1Q92973 898 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 RGMAQ96B86 450 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 TRIM43Q96BQ3 446 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 CDK5RAP3Q96JB5 506 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 SGCZQ96LD1 299 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 PLEKHG4BQ96PX9 1271 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 C7orf25Q9BPX7 421 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 SENP7Q9BQF6 1050 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 EIF2AK1Q9BQI3 630 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 SOX7Q9BT81 388 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 MMTAG2Q9BU76 263 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 TEKT3Q9BXF9 490 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 HAPLN2Q9GZV7 340 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 MAF1Q9H063 256 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 FAM49AQ9H0Q0 323 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 CHCHD3Q9NX63 227 aaKnown RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 VWA7Q9Y334 891 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 WDFY4Q6ZS81 3184 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 C5orf42Q9H799 3197 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 NFASCO94856 1347 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 LOXHD1Q8IVV2 1947 aa5.17□□□□□ -1.58
ATPAF1-203ENST00000460928 IGKV6D-21A0A0A0MT36 114 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 KRTAP23-1A1A580 65 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 FAM171A2A8MVW0 826 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 E9PMD0 336 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PES1O00541 588 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PPFIA4O75335 1185 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CSDE1O75534 798 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 SLITRK3O94933 977 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 GCFC2P16383 781 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PIK3CBP42338 1070 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CPT1AP50416 773 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CDK7P50613 346 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 STAT5BP51692 787 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CCL23P55773 120 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 ATP2C1P98194 919 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PRKCEQ02156 737 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 HHEXQ03014 270 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CD69Q07108 199 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PPFIA1Q13136 1202 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PPP2R5CQ13362 524 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 GRM7Q14831 915 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 KARSQ15046 597 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 STK38Q15208 465 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 KLHL10Q6JEL2 608 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 KCNV1Q6PIU1 500 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 MOXD1Q6UVY6 613 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 LEKR1Q6ZMV7 388 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 ANO5Q75V66 913 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 GAS2L3Q86XJ1 694 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CATSPER3Q86XQ3 398 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 RHOT1Q8IXI2 618 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 LRRC71Q8N4P6 559 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PCSK9Q8NBP7 692 aaKnown RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 OR5AN1Q8NGI8 311 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 GOLGA5Q8TBA6 731 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 STAMQ92783 540 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 LPPQ93052 612 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 EPSTI1Q96J88 318 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 CDHR1Q96JP9 859 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 GLT1D1Q96MS3 346 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 RIT2Q99578 217 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 LXNQ9BS40 222 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 RSAD1Q9HA92 442 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 ZNF302Q9NR11 478 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 TBC1D22BQ9NU19 505 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 C11orf21Q9P2W6 132 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 FBXO2Q9UK22 296 aaPredicted RBP5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PCDHA12Q9UN75 941 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 Q9Y3F1 56 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 PCDHA10Q9Y5I2 948 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 SPTBN4Q9H254 2564 aa5.16□□□□□ -1.58
ATPAF1-203ENST00000460928 MYO9BQ13459 2157 aa5.15□□□□□ -1.58
ATPAF1-203ENST00000460928 USP34Q70CQ2 3546 aa5.15□□□□□ -1.58
ATPAF1-203ENST00000460928 F5H423 210 aaPredicted RBP5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 AKR1B10O60218 316 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 SMC2O95347 1197 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 CD4P01730 458 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 MYF5P13349 255 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 CTSSP25774 331 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 CASP1P29466 404 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 CCT6AP40227 531 aaKnown RBP5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 PRPHP41219 470 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 CLCN3P51790 818 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 HK3P52790 923 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 INHBCP55103 352 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 RAPGEF1Q13905 1077 aa5.15□□□□□ -1.59
ATPAF1-203ENST00000460928 KRT72Q14CN4 511 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms