RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 TEKT4Q8WW24 435 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 ANP32BQ92688 251 aaKnown RBP14.39□□□□□ -0.11
HDLBP-229ENST00000460826 ZNF830Q96NB3 372 aaPredicted RBP14.39□□□□□ -0.11
HDLBP-229ENST00000460826 KCNF1Q9H3M0 494 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 PCDH18Q9HCL0 1135 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.39□□□□□ -0.11
HDLBP-229ENST00000460826 KLHL11Q9NVR0 708 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 TMEM248Q9NWD8 314 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 SPATA6Q9NWH7 488 aaPredicted RBP14.39□□□□□ -0.11
HDLBP-229ENST00000460826 LCMT1Q9UIC8 334 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 OR51B4Q9Y5P0 310 aa14.39□□□□□ -0.11
HDLBP-229ENST00000460826 EML5Q05BV3 1969 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 WASH3PC4AMC7 463 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 SGK1O00141 431 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 EEF2KO00418 725 aaKnown RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 ADAM23O75077 832 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 CD48P09326 243 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 HNRNPLP14866 589 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 OR1E1P30953 314 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 ARSEP51690 589 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 TPI1P60174 286 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 SATB1Q01826 763 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 EIF4HQ15056 248 aaKnown RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 SETD3Q86TU7 594 aaPredicted RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 TXNDC5Q8NBS9 432 aaKnown RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 OR7D4Q8NG98 312 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 TTC17Q96AE7 1141 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 PSMB7Q99436 277 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 FEM1AQ9BSK4 669 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 CWC15Q9P013 229 aaKnown RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 THAP10Q9P2Z0 257 aaPredicted RBP14.38□□□□□ -0.11
HDLBP-229ENST00000460826 DNAI1Q9UI46 699 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
HDLBP-229ENST00000460826 SHROOM3Q8TF72 1996 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 A0A0D9SEW6 157 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 WASH4PA8MWX3 477 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 POLR2EP19388 210 aaKnown RBP14.37□□□□□ -0.11
HDLBP-229ENST00000460826 IL12RB1P42701 662 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 MAPKAPK2P49137 400 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 PLK1P53350 603 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 CDH6P55285 790 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 MMRN1Q13201 1228 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 SLC12A1Q13621 1099 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 DPYSQ14117 519 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 ZNF234Q14588 700 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 PTPRNQ16849 979 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 C6orf118Q5T5N4 469 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 C11orf63Q6NUN7 778 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 RFX8Q6ZV50 586 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 POLNQ7Z5Q5 900 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 C1orf210Q8IVY1 113 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 RTL3Q8N8U3 475 aaKnown RBP14.37□□□□□ -0.11
HDLBP-229ENST00000460826 FAM71BQ8TC56 605 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 TSC1Q92574 1164 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 MRGPRX3Q96LB0 322 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 IER2Q9BTL4 223 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 MUC3BQ9H195 1237 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 NOL6Q9H6R4 1146 aaKnown RBP14.37□□□□□ -0.11
HDLBP-229ENST00000460826 MMP17Q9ULZ9 603 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 MFHAS1Q9Y4C4 1052 aa14.37□□□□□ -0.11
HDLBP-229ENST00000460826 FANCMQ8IYD8 2048 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 ILVBLA1L0T0 632 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 MACROD2A1Z1Q3 448 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 GRID2IPA4D2P6 1211 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 FGF10O15520 208 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-229ENST00000460826 GALR2O43603 387 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-229ENST00000460826 TIMM44O43615 452 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 SPOPO43791 374 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 SNAP91O60641 907 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 MOCS3O95396 460 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
HDLBP-229ENST00000460826 DLDP09622 509 aaKnown RBP14.36□□□□□ -0.11
HDLBP-229ENST00000460826 TNNT1P13805 278 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 ERCC2P18074 760 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 COL9A1P20849 921 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 AMPD1P23109 780 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 GLDCP23378 1020 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 IL4RP24394 825 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 NTSR1P30989 418 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 HTR7P34969 479 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 ACVRL1P37023 503 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 SLC1A1P43005 524 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 STK19P49842 368 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-229ENST00000460826 NAP1L1P55209 391 aaKnown RBP14.36□□□□□ -0.11
HDLBP-229ENST00000460826 GNA12Q03113 381 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 DMC1Q14565 340 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 TSSK4Q6SA08 328 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 TMEM92Q6UXU6 159 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 CHPFQ8IZ52 775 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 ZNF366Q8N895 744 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 LRRC57Q8N9N7 239 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 NETO2Q8NC67 525 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 CCDC26Q8TAB7 109 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 KCNV2Q8TDN2 545 aa14.36□□□□□ -0.11
HDLBP-229ENST00000460826 UCMAQ8WVF2 138 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms