RNA–Protein interactions for RNA: ENST00000460758.1

SHISA5-211, Transcript of shisa family member 5, humanhuman

TSL 1 (best)

Gene SHISA5, Length 1,297 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA5-211ENST00000460758 ACRBPQ8NEB7 543 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 PIGKQ92643 395 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 ARHGEF26Q96DR7 871 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 DDX50Q9BQ39 737 aaKnown RBP13.24□□□□□ -0.29
SHISA5-211ENST00000460758 ADAM33Q9BZ11 813 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 TMEM245Q9H330 911 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 TMEM74BQ9NUR3 256 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 MYO1AQ9UBC5 1043 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
SHISA5-211ENST00000460758 PCDHA13Q9Y5I0 950 aa13.24□□□□□ -0.29
SHISA5-211ENST00000460758 SYNJ2BP-COX16A0A087WUM0 186 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 SIGLEC16A6NMB1 481 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 TIMM44O43615 452 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 ZNF217O75362 1048 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 CYP1A2P05177 515 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 EPHX1P07099 455 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 TMEM253P0C7T8 217 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 KRT3P12035 628 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 TACR2P21452 398 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 RNASE9P60153 205 aaKnown RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 LMAN2Q12907 356 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 MAMLD1Q13495 774 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 FNDC3BQ53EP0 1204 aaKnown RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 FSCBQ5H9T9 825 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 SPDYCQ5MJ68 293 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 PPP1R15BQ5SWA1 713 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 STPG1Q5TH74 334 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 PEAR1Q5VY43 1037 aaPredicted RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 LYSMD4Q5XG99 296 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 SLC36A4Q6YBV0 504 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 ARCQ7LC44 396 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 CHSY1Q86X52 802 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 CACUL1Q86Y37 369 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 SLC41A1Q8IVJ1 513 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 LGI2Q8N0V4 545 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 CARNMT1Q8N4J0 409 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 JOSD2Q8TAC2 188 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 FIBINQ8TAL6 211 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 CTNNBL1Q8WYA6 563 aaPredicted RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 BTN2A3PQ96KV6 586 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 PRMT1Q99873 361 aaKnown RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 DESI2Q9BSY9 194 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 EDEM2Q9BV94 578 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 KCNF1Q9H3M0 494 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 PRDM16Q9HAZ2 1276 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 LUC7LQ9NQ29 371 aaKnown RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 PARVAQ9NVD7 372 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 DDIT4Q9NX09 232 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 USP36Q9P275 1121 aaKnown RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 INTS6Q9UL03 887 aaKnown RBP13.23□□□□□ -0.29
SHISA5-211ENST00000460758 INTUQ9ULD6 942 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 SCINQ9Y6U3 715 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 PLXNA2O75051 1894 aa13.23□□□□□ -0.29
SHISA5-211ENST00000460758 TYW5A2RUC4 315 aaKnown RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 KCNU1A8MYU2 1149 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 ZBTB24O43167 697 aaPredicted RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 SYNCRIPO60506 623 aaKnown RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 LUC7L3O95232 432 aaKnown RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 DLDP09622 509 aaKnown RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 TFE3P19532 575 aaPredicted RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 ITPKAP23677 461 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 NOS2P35228 1153 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 FLT3P36888 993 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 MATKP42679 507 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 CAMK2GQ13555 558 aaPredicted RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 CDH18Q13634 790 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 TRNP1Q6NT89 227 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 METTL3Q86U44 580 aaKnown RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 CIR1Q86X95 450 aaPredicted RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 TMPRSS6Q8IU80 811 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 EMC1Q8N766 993 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 ZNF557Q8N988 423 aaPredicted RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 MYO19Q96H55 970 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 HSPA12BQ96MM6 686 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 ZNF830Q96NB3 372 aaPredicted RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 MCEEQ96PE7 176 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 MRPL47Q9HD33 250 aaKnown RBP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.22□□□□□ -0.29
SHISA5-211ENST00000460758 PILRBQ9UKJ0 227 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 TMEM131Q92545 1883 aa13.22□□□□□ -0.29
SHISA5-211ENST00000460758 ASCC3Q8N3C0 2202 aaKnown RBP13.21□□□□□ -0.29
SHISA5-211ENST00000460758 C2CD4BA6NLJ0 364 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 F5H5T6 163 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 TM4SF5O14894 197 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 KHNYNO15037 678 aaKnown RBP13.21□□□□□ -0.29
SHISA5-211ENST00000460758 GPD1P21695 349 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 CCR1P32246 355 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 RFC1P35251 1148 aaPredicted RBP13.21□□□□□ -0.29
SHISA5-211ENST00000460758 GGCXP38435 758 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 CSKP41240 450 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 DPP6P42658 865 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 TPMTP51580 245 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 IRAK1P51617 712 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 VAV2P52735 878 aa13.21□□□□□ -0.29
SHISA5-211ENST00000460758 RPL7AP62424 266 aaKnown RBP13.21□□□□□ -0.29
SHISA5-211ENST00000460758 KRT83P78385 493 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms