RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 LIFRP42702 1097 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 MVDP53602 400 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 SSBP2P81877 361 aaPredicted RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 TBX2Q13207 712 aaPredicted RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 EZH2Q15910 746 aaKnown RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 PFKFB3Q16875 520 aaPredicted RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 CERKLQ49MI3 558 aaPredicted RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 WDR45BQ5MNZ6 344 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 CC2D1BQ5T0F9 858 aaKnown RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 RETSATQ6NUM9 610 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 DENND1BQ6P3S1 775 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 MTFR2Q6P444 385 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 ZNF813Q6ZN06 617 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 RBM44Q6ZP01 1051 aaKnown RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 HEATR4Q86WZ0 1026 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 RHPN2Q8IUC4 686 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 SCN4BQ8IWT1 228 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 PAQR4Q8N4S7 273 aaPredicted RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 OR52N4Q8NGI2 321 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 GADD45GIP1Q8TAE8 222 aaPredicted RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 DDB2Q92466 427 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 PPP1R10Q96QC0 940 aaKnown RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 NAP1L4Q99733 375 aaKnown RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 EFHD1Q9BUP0 239 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 KRTAP2-2Q9BYT5 123 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 GPR63Q9BZJ6 419 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 ERVK-5Q9HDB9 667 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 UBN1Q9NPG3 1134 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 TLR8Q9NR97 1041 aaKnown RBP3.76□□□□□ -1.81
RFC4-211ENST00000460408 THAP1Q9NVV9 213 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 GDAQ9Y2T3 454 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 TMEM98Q9Y2Y6 226 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 RB1CC1Q8TDY2 1594 aa3.76□□□□□ -1.81
RFC4-211ENST00000460408 EMSYQ7Z589 1322 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 LMTK3Q96Q04 1460 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 MANSC4A6NHS7 340 aaPredicted RBP3.75□□□□□ -1.81
RFC4-211ENST00000460408 FAM90A7PA6NKC0 464 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 FAM90A22PA8MWA6 464 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 FAM90A12PA8MX19 464 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 FAM90A23PA8MXZ1 464 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 MCIDASD6RGH6 385 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 J3KRW8 73 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 DSCR3O14972 297 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 KLK10O43240 276 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 SH3BP5O60239 455 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 METTL18O95568 372 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 PRKCGP05129 697 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 CPA1P15085 419 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 RPS6KB1P23443 525 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 NR1H2P55055 460 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 GPR162Q16538 588 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 SRSF7Q16629 238 aaKnown RBP eCLIP3.75□□□□□ -1.81
RFC4-211ENST00000460408 ANXA2RQ3ZCQ2 193 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 GXYLT1Q4G148 440 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 TMEM119Q4V9L6 283 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 LIPMQ5VYY2 423 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 C11orf87Q6NUJ2 197 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 ZNF782Q6ZMW2 699 aaPredicted RBP3.75□□□□□ -1.81
RFC4-211ENST00000460408 ZNF66Q6ZN08 573 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 GALNT7Q86SF2 657 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 PAF1Q8N7H5 531 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 TEX19Q8NA77 164 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 LSM14AQ8ND56 463 aaKnown RBP3.75□□□□□ -1.81
RFC4-211ENST00000460408 WASF1Q92558 559 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 ABHD14AQ9BUJ0 271 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 AGXT2Q9BYV1 514 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 TRIM2Q9C040 744 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 UBA5Q9GZZ9 404 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 STN1Q9H668 368 aaKnown RBP3.75□□□□□ -1.81
RFC4-211ENST00000460408 IL21RQ9HBE5 538 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 ARL8BQ9NVJ2 186 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 HDAC6Q9UBN7 1215 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 KLQ9UEF7 1012 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 MAFFQ9ULX9 164 aa3.75□□□□□ -1.81
RFC4-211ENST00000460408 ZNF804BA4D1E1 1349 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 CCDC196A0A1B0GTZ2 297 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 A6NLC8 198 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 PLAUP00749 431 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 HNRNPA1P09651 372 aaKnown RBP eCLIP3.74□□□□□ -1.81
RFC4-211ENST00000460408 TNNT1P13805 278 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 AKR1A1P14550 325 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 PKMP14618 531 aaKnown RBP3.74□□□□□ -1.81
RFC4-211ENST00000460408 ST6GAL1P15907 406 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 XBP1P17861 261 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 TACR3P29371 465 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 RPS6KA3P51812 740 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 YPEL5P62699 121 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 RHAGQ02094 409 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 ZBTB16Q05516 673 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 ALKBH1Q13686 389 aaKnown RBP3.74□□□□□ -1.81
RFC4-211ENST00000460408 KIAA1755Q5JYT7 1200 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 SLC9C2Q5TAH2 1124 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 MEX3CQ5U5Q3 659 aaKnown RBP3.74□□□□□ -1.81
RFC4-211ENST00000460408 DHRS13Q6UX07 377 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 TMEM200AQ86VY9 491 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 ANKRD44Q8N8A2 993 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 FAM110DQ8TAY7 271 aaPredicted RBP3.74□□□□□ -1.81
RFC4-211ENST00000460408 C2CD4CQ8TF44 421 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 KCNJ9Q92806 393 aa3.74□□□□□ -1.81
RFC4-211ENST00000460408 MAP4K1Q92918 833 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms