RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 DPYSQ14117 519 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 ZNF234Q14588 700 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 PTPRNQ16849 979 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 RFX8Q6ZV50 586 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 PSTKQ8IV42 348 aaKnown RBP13.18□□□□□ -0.3
COL18A1-206ENST00000459895 CCDC117Q8IWD4 279 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-206ENST00000459895 MAML2Q8IZL2 1156 aaPredicted RBP13.18□□□□□ -0.3
COL18A1-206ENST00000459895 SPEM1Q8N4L4 309 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 RTL3Q8N8U3 475 aaKnown RBP13.18□□□□□ -0.3
COL18A1-206ENST00000459895 ERLEC1Q96DZ1 483 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 ALG14Q96F25 216 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 PSMB7Q99436 277 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 MUC3BQ9H195 1237 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 PCDH18Q9HCL0 1135 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 ELOVL2Q9NXB9 296 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 STARD13Q9Y3M8 1113 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 MFHAS1Q9Y4C4 1052 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 OR51B4Q9Y5P0 310 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 RAD54BQ9Y620 910 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 ADGRG1Q9Y653 693 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 FANCMQ8IYD8 2048 aa13.18□□□□□ -0.3
COL18A1-206ENST00000459895 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 A0A0D9SEW6 157 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 MACROD2A1Z1Q3 448 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 BTNL10A8MVZ5 291 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 FGF10O15520 208 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 GALR2O43603 387 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 CD48P09326 243 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 TDGF1P13385 188 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 HOXB2P14652 356 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 COL9A1P20849 921 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 COMTP21964 271 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 GLDCP23378 1020 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 OR1E1P30953 314 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 HTR7P34969 479 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 ARHGAP25P42331 645 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 MARCKSL1P49006 195 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 STK19P49842 368 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 CCR3P51677 355 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 MRPS21P82921 87 aaKnown RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 DMC1Q14565 340 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 ANGPT1Q15389 498 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 C6orf118Q5T5N4 469 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 RNF219Q5W0B1 726 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 TSSK4Q6SA08 328 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 SETD3Q86TU7 594 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 C1orf210Q8IVY1 113 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 CHPFQ8IZ52 775 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 NPWQ8N729 165 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 ZNF366Q8N895 744 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 DCAF4L2Q8NA75 395 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 OR7D4Q8NG98 312 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 TSC1Q92574 1164 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 ANP32BQ92688 251 aaKnown RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 MYO19Q96H55 970 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 MRGPRX3Q96LB0 322 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 KIAA1522Q9P206 1035 aaPredicted RBP13.17□□□□□ -0.3
COL18A1-206ENST00000459895 DNAI1Q9UI46 699 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 VPS28Q9UK41 221 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 CAPN6Q9Y6Q1 641 aa13.17□□□□□ -0.3
COL18A1-206ENST00000459895 GRID2IPA4D2P6 1211 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 H3BRJ5 948 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 K7ESF4 209 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 LAMTOR5O43504 91 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 SPOPO43791 374 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 SNAP91O60641 907 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 PAPSS2O95340 614 aaPredicted RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 KRT1P04264 644 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 DLDP09622 509 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 HLA-EP13747 358 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 POLR2EP19388 210 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 ARSEP51690 589 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 CDH6P55285 790 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 GNA12Q03113 381 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 DMWDQ09019 674 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 DPYSL3Q14195 570 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 KRT81Q14533 505 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 HADHQ16836 314 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 HSF5Q4G112 596 aaPredicted RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 ATP13A4Q4VNC1 1196 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 FNDC3BQ53EP0 1204 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 TMEM92Q6UXU6 159 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 NUDT18Q6ZVK8 323 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 SYT13Q7L8C5 426 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 POLNQ7Z5Q5 900 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 CCDC26Q8TAB7 109 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 TTC17Q96AE7 1141 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 CSPG4P5Q96PW8 444 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 GABRG3Q99928 467 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 FEM1AQ9BSK4 669 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 NOL6Q9H6R4 1146 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 CD248Q9HCU0 757 aa13.16□□□□□ -0.3
COL18A1-206ENST00000459895 CWC15Q9P013 229 aaKnown RBP13.16□□□□□ -0.3
COL18A1-206ENST00000459895 THAP10Q9P2Z0 257 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms