RNA–Protein interactions for RNA: ENST00000458715.5

COL16A1-205, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 706 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-205ENST00000458715 TKTL2Q9H0I9 626 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 SIK2Q9H0K1 926 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 FANCLQ9NW38 375 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 ARHGEF38Q9NXL2 777 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 SLCO3A1Q9UIG8 710 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 SLC25A13Q9UJS0 675 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 VANGL2Q9ULK5 521 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 HS3ST4Q9Y661 456 aa16.5■□□□□ 0.23
COL16A1-205ENST00000458715 TNRC6BQ9UPQ9 1833 aaKnown RBP16.49■□□□□ 0.23
COL16A1-205ENST00000458715 EPG5Q9HCE0 2579 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 LRRC10BA6NIK2 292 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 LRRC72A6NJI9 287 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 TTC34A8MYJ7 566 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 ZNF883P0CG24 379 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 PDGFRAP16234 1089 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 CD27P26842 260 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 SLC8A1P32418 973 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 SOX5P35711 763 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 STAT1P42224 750 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 POLR2FP61218 127 aaKnown RBP16.49■□□□□ 0.23
COL16A1-205ENST00000458715 KRT83P78385 493 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 CDR2Q01850 454 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 GRIK2Q13002 908 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 CACNA1EQ15878 2313 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 TAF3Q5VWG9 929 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 SNX19Q92543 992 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 FEM1AQ9BSK4 669 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 NAT10Q9H0A0 1025 aaKnown RBP16.49■□□□□ 0.23
COL16A1-205ENST00000458715 GANQ9H2C0 597 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 C6orf106Q9H6K1 298 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-205ENST00000458715 FAM207AQ9NSI2 230 aaPredicted RBP16.49■□□□□ 0.23
COL16A1-205ENST00000458715 PIGVQ9NUD9 493 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 TMEM63CQ9P1W3 806 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 ADAMTS1Q9UHI8 967 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 TBC1D30Q9Y2I9 924 aa16.49■□□□□ 0.23
COL16A1-205ENST00000458715 ASCC3Q8N3C0 2202 aaKnown RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 GIPC1O14908 333 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 GJB3O75712 270 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 FSBPO95073 299 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 TRIM16O95361 564 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 MMEP08473 750 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 CTSOP43234 321 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 NOMO3P69849 1222 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 SUZ12Q15022 739 aaKnown RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 KLHL40Q2TBA0 621 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 FAM46CQ5VWP2 391 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 CXorf57Q6NSI4 855 aaKnown RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 SETD3Q86TU7 594 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 MMAAQ8IVH4 418 aaKnown RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 NEK11Q8NG66 645 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 OR2T34Q8NGX1 318 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 C1orf216Q8TAB5 229 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 CPA5Q8WXQ8 436 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 PTPRN2Q92932 1015 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 IGSF8Q969P0 613 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 BIRC7Q96CA5 298 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 RPL10LQ96L21 214 aaKnown RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 PCMTD1Q96MG8 357 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 HAPLN3Q96S86 360 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 FAM129BQ96TA1 746 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 C2orf49Q9BVC5 232 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 FSCN3Q9NQT6 498 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 LIMA1Q9UHB6 759 aaKnown RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 TMEM59LQ9UK28 342 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 VPS28Q9UK41 221 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 FARP1Q9Y4F1 1045 aaPredicted RBP16.48■□□□□ 0.23
COL16A1-205ENST00000458715 PCDHB9Q9Y5E1 797 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 CHD8Q9HCK8 2581 aa16.48■□□□□ 0.23
COL16A1-205ENST00000458715 CEP192Q8TEP8 1941 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 DRGXA6NNA5 263 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 ALOX15BO15296 676 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 ATP9BO43861 1147 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 DFNA5O60443 496 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 RNASEH2AO75792 299 aaKnown RBP16.47■□□□□ 0.23
COL16A1-205ENST00000458715 GFPT2O94808 682 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 ADCY5O95622 1261 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CCDC172P0C7W6 258 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CD59P13987 128 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 ZNF18P17022 549 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 GOT1P17174 413 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 MZF1P28698 734 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-205ENST00000458715 GRIA4P48058 902 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 COPB1P53618 953 aaKnown RBP16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CCDC15Q0P6D6 951 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 SYCP1Q15431 976 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 ARL13BQ3SXY8 428 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 ACCSLQ4AC99 568 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 NAA35Q5VZE5 725 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 KIAA0895LQ68EN5 471 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CAVIN1Q6NZI2 390 aaKnown RBP16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CIR1Q86X95 450 aaPredicted RBP16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CCDC114Q96M63 670 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 TBCBQ99426 244 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 MUC3BQ9H195 1237 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 MTG2Q9H4K7 406 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 RETREG1Q9H6L5 497 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 GAREM1Q9H706 876 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 NOCTQ9UK39 431 aaKnown RBP16.47■□□□□ 0.23
COL16A1-205ENST00000458715 PCDHGB2Q9Y5G2 931 aa16.47■□□□□ 0.23
COL16A1-205ENST00000458715 CEP295Q9C0D2 2601 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms