RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 GBE1Q04446 702 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 PRKG1Q13976 671 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ADGRE1Q14246 886 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 GRAMD1BQ3KR37 738 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 VWA5B1Q5TIE3 1220 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 EEF1DP3Q658K8 133 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 MAP1SQ66K74 1059 aaPredicted RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 TTC39CQ8N584 583 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ZBTB8BQ8NAP8 495 aaPredicted RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 RNF149Q8NC42 400 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ADCY4Q8NFM4 1077 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 LENG1Q96BZ8 264 aaPredicted RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 MPP4Q96JB8 637 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 HEXIM2Q96MH2 286 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 GCNAQ96QF7 691 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 C11orf84Q9BUA3 381 aaPredicted RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 CDT1Q9H211 546 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 COG4Q9H9E3 785 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 RPF1Q9H9Y2 349 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 IFT122Q9HBG6 1241 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 NGRNQ9NPE2 291 aaKnown RBP8.7□□□□□ -1.02
VPS50-208ENST00000458707 HOXC10Q9NYD6 342 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 HSFX1Q9UBD0 423 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CIDEBQ9UHD4 219 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 RIMS3Q9UJD0 308 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ADAM28Q9UKQ2 775 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 PADI4Q9UM07 663 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 TNFSF13BQ9Y275 285 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 ITM2BQ9Y287 266 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 CROCCQ5TZA2 2017 aa8.7□□□□□ -1.02
VPS50-208ENST00000458707 MYLKQ15746 1914 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 A0A0A0MRY4 1105 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 HACD1B0YJ81 288 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 ZBTB42B2RXF5 422 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 TXNDC9O14530 226 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 DCXO43602 365 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 GRAP2O75791 330 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 DGKIO75912 1065 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 TNFAIP8O95379 198 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 PGM3O95394 542 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 STAU1O95793 577 aaKnown RBP8.69□□□□□ -1.02
VPS50-208ENST00000458707 ITGB3P05106 788 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 CCDC166P0CW27 439 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 P4HA1P13674 534 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 CPA3P15088 417 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 NCF2P19878 526 aaPredicted RBP8.69□□□□□ -1.02
VPS50-208ENST00000458707 PMLP29590 882 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 PTPN9P43378 593 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SLC6A3Q01959 620 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 TMEM62Q0P6H9 643 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 FSTL1Q12841 308 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 APOFQ13790 326 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 TNFAIP1Q13829 316 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS50-208ENST00000458707 PKDCCQ504Y2 493 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 PIGGQ5H8A4 983 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SH2D4BQ5SQS7 431 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 RARS2Q5T160 578 aaKnown RBP8.69□□□□□ -1.02
VPS50-208ENST00000458707 HEATR6Q6AI08 1181 aaKnown RBP8.69□□□□□ -1.02
VPS50-208ENST00000458707 SCYL2Q6P3W7 929 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 KCNT2Q6UVM3 1135 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 C16orf89Q6UX73 402 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SAPCD2Q86UD0 394 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 LRRC49Q8IUZ0 686 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 TMEM192Q8IY95 271 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 METTL25Q8N6Q8 603 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 ANKK1Q8NFD2 765 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SLC7A14Q8TBB6 771 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 LRRN4Q8WUT4 740 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 CENPIQ92674 756 aaPredicted RBP8.69□□□□□ -1.02
VPS50-208ENST00000458707 NMD3Q96D46 503 aaKnown RBP8.69□□□□□ -1.02
VPS50-208ENST00000458707 SPATA13Q96N96 652 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SERPINI1Q99574 410 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 CPNE1Q99829 537 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SHCBP1LQ9BZQ2 653 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 AS3MTQ9HBK9 375 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 MYOZ2Q9NPC6 264 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 SLC17A6Q9P2U8 582 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 HESX1Q9UBX0 185 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 TSPAN16Q9UKR8 245 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 DMTF1Q9Y222 760 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 LZTS1Q9Y250 596 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 PSAT1Q9Y617 370 aa8.69□□□□□ -1.02
VPS50-208ENST00000458707 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.68□□□□□ -1.02
VPS50-208ENST00000458707 LOC100653049A0A140TA62 436 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 RGSL1A5PLK6 1076 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 LACTBL1A8MY62 500 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 G3V2L1 256 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 H2AFYO75367 372 aaKnown RBP8.68□□□□□ -1.02
VPS50-208ENST00000458707 KRT34O76011 436 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 CRTAMO95727 393 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 THRAP10827 490 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 TYK2P29597 1187 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 ADSLP30566 484 aaPredicted RBP8.68□□□□□ -1.02
VPS50-208ENST00000458707 TCF7P36402 384 aaPredicted RBP8.68□□□□□ -1.02
VPS50-208ENST00000458707 GP5P40197 560 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 GARSP41250 739 aaKnown RBP8.68□□□□□ -1.02
VPS50-208ENST00000458707 HSPA13P48723 471 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 HK2P52789 917 aa8.68□□□□□ -1.02
VPS50-208ENST00000458707 NDST1P52848 882 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms