RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 BTN2A3PQ96KV6 586 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 MYRFLQ96LU7 910 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 QKIQ96PU8 341 aaKnown RBP eCLIP9.21□□□□□ -0.94
VPS50-207ENST00000458530 GCNAQ96QF7 691 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 TMEM121Q9BTD3 319 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 FRMD8Q9BZ67 464 aaPredicted RBP9.21□□□□□ -0.94
VPS50-207ENST00000458530 PHACTR1Q9C0D0 580 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 KLC2Q9H0B6 622 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 MED4Q9NPJ6 270 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 ENTPD7Q9NQZ7 604 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 ZDHHC18Q9NUE0 388 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 ZNF446Q9NWS9 450 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 MARCH2Q9P0N8 246 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 CALCOCO1Q9P1Z2 691 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 OR12D3Q9UGF7 316 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 DPP7Q9UHL4 492 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 DNMT3LQ9UJW3 386 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 INSL5Q9Y5Q6 135 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 IRAK3Q9Y616 596 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 OTOGLQ3ZCN5 2332 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 DMXL1Q9Y485 3027 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 NUP205Q92621 2012 aa9.21□□□□□ -0.94
VPS50-207ENST00000458530 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 GOLGA6BA6NDN3 693 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 GOLGA6L10A6NI86 522 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 ADAM12O43184 909 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 OPA1O60313 960 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 SOAT2O75908 522 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 FGF19O95750 216 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 GLUD1P00367 558 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 LRG1P02750 347 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 AMPD1P23109 780 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 EPHB2P29323 1055 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 ATP5C1P36542 298 aaKnown RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 ID4P47928 161 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 NRIP1P48552 1158 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 VPS41P49754 854 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 ITGA8P53708 1063 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 USP46P62068 366 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 ZNF33AQ06730 810 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 EFEMP1Q12805 493 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 GPS1Q13098 491 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 EIF4EBP2Q13542 120 aaPredicted RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 BLOC1S3Q6QNY0 202 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 TMC3Q7Z5M5 1100 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 ZC3H18Q86VM9 953 aaKnown RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 LRRC49Q8IUZ0 686 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 PPIL6Q8IXY8 311 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 KRT222Q8N1A0 295 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 PYROXD2Q8N2H3 581 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 TMEM105Q8N8V8 129 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 FBXO25Q8TCJ0 367 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 PSMG2Q969U7 264 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 PLD4Q96BZ4 506 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 C1orf74Q96LT6 269 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 FAM118BQ9BPY3 351 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 DDX50Q9BQ39 737 aaKnown RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 CRISPLD1Q9H336 500 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 RETREG1Q9H6L5 497 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 NMUR1Q9HB89 426 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 GRHL1Q9NZI5 618 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 SFMBT1Q9UHJ3 866 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 TPX2Q9ULW0 747 aaKnown RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 HPCAL4Q9UM19 191 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 NEU2Q9Y3R4 380 aa9.2□□□□□ -0.94
VPS50-207ENST00000458530 MYO18AQ92614 2054 aaKnown RBP9.2□□□□□ -0.94
VPS50-207ENST00000458530 SLC12A8A0AV02 714 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 KCNU1A8MYU2 1149 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 DCLK1O15075 740 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 TEX28O15482 410 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 KCNN4O15554 427 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 MSI1O43347 362 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 MFSD11O43934 449 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 LILRB3O75022 631 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 PPFIA2O75334 1257 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 PAGE1O75459 146 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 LRIG2O94898 1065 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 SEC24AO95486 1093 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 CXCL14O95715 111 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 MOCS2O96007 188 aaPredicted RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 IGLV3-27P01718 113 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 PFKLP17858 780 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 ERCC2P18074 760 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 ECHS1P30084 290 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 HOXC13P31276 330 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 SLC11A2P49281 568 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 HARS2P49590 506 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 EIF3BP55884 814 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 DHX9Q08211 1270 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 TWF1Q12792 350 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 TRIP13Q15645 432 aaPredicted RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 DUSP6Q16828 381 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 RWDD4Q6NW29 188 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 ZDHHC24Q6UX98 284 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 NPNTQ6UXI9 565 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 LRIG3Q6UXM1 1119 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 ARHGEF18Q6ZSZ5 1173 aa9.19□□□□□ -0.94
VPS50-207ENST00000458530 TRMT10CQ7L0Y3 403 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 ZCCHC9Q8N567 271 aaKnown RBP9.19□□□□□ -0.94
VPS50-207ENST00000458530 FAM71DQ8N9W8 422 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms