RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 TRUB1Q8WWH5 349 aaKnown RBP7□□□□□ -1.29
CUBNP3-201ENST00000457461 CAPNS2Q96L46 248 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 SNX18Q96RF0 628 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 FERD3LQ96RJ6 166 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 DNAJC7Q99615 494 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 FERMT1Q9BQL6 677 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 KIFC3Q9BVG8 833 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 EDEM3Q9BZQ6 932 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 OR2B2Q9GZK3 357 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 RNF38Q9H0F5 515 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 PABPC3Q9H361 631 aaKnown RBP7□□□□□ -1.29
CUBNP3-201ENST00000457461 TMEM134Q9H6X4 195 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 RC3H2Q9HBD1 1191 aaKnown RBP7□□□□□ -1.29
CUBNP3-201ENST00000457461 GPAMQ9HCL2 828 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 VPS45Q9NRW7 570 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 SLC38A7Q9NVC3 462 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 KLHL14Q9P2G3 628 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 EXTL2Q9UBQ6 330 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 AMACRQ9UHK6 382 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 PFDN2Q9UHV9 154 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 DMGDHQ9UI17 866 aaKnown RBP7□□□□□ -1.29
CUBNP3-201ENST00000457461 SNX12Q9UMY4 172 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 ZNF175Q9Y473 711 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 SNX5Q9Y5X3 404 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 FRMPD3Q5JV73 1810 aa7□□□□□ -1.29
CUBNP3-201ENST00000457461 DCDC2CA8MYV0 355 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 BTN3A1O00481 513 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 AXIN1O15169 862 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 PMM2O15305 246 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 DENRO43583 198 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ZBTB14O43829 449 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CCDC22O60826 627 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ZWINTO95229 277 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CLPTM1O96005 669 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 F2P00734 622 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 UQCRBP14927 111 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CDH2P19022 906 aaPredicted RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 GARTP22102 1010 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ACAT1P24752 427 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 RRM2P31350 389 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 SLC5A2P31639 672 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 HNRNPH3P31942 346 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 IDUAP35475 653 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 PAFAH1B1P43034 410 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ST13P50502 369 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 VCPP55072 806 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ADKP55263 362 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 FCGRTP55899 365 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 NKX3-2P78367 333 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 IFITM2Q01629 132 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TNFAIP2Q03169 654 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 KCNH2Q12809 1159 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 STX3Q13277 289 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CAPSQ13938 189 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 MXD4Q14582 209 aaPredicted RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 SF3B4Q15427 424 aaKnown RBP eCLIP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 MEA1Q16626 185 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ATAD3BQ5T9A4 648 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 SDE2Q6IQ49 451 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 AAGABQ6PD74 315 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 RBM44Q6ZP01 1051 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 PRR23BQ6ZRT6 265 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TRMT1LQ7Z2T5 733 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 HDDC2Q7Z4H3 204 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 STK32CQ86UX6 486 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ZNF410Q86VK4 478 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CDR2LQ86X02 465 aaPredicted RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CAMK1DQ8IU85 385 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 PALM2Q8IXS6 379 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 MARVELD2Q8N4S9 558 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 OR6J1Q8NGC5 347 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 RIN3Q8TB24 985 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 FATE1Q969F0 183 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TMEM143Q96AN5 459 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 PLEKHA8Q96JA3 519 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 FAR2Q96K12 515 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TSNARE1Q96NA8 513 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 SERPINB12Q96P63 405 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 BBS4Q96RK4 519 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ELAC2Q9BQ52 826 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 CBWD1Q9BRT8 395 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 C17orf80Q9BSJ5 609 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 LRRC1Q9BTT6 524 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 NUSAP1Q9BXS6 441 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 MROQ9BYG7 248 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 NFKBIZQ9BYH8 718 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ISCUQ9H1K1 167 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 RNPEPQ9H4A4 650 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 KCNK13Q9HB14 408 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 STARD7Q9NQZ5 370 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 MAN1C1Q9NR34 630 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ABHD10Q9NUJ1 306 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TRNAU1APQ9NX07 287 aaKnown RBP6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 HSPBP1Q9NZL4 362 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 TBC1D14Q9P2M4 693 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 SEPT3Q9UH03 358 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 VPS4AQ9UN37 437 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 ARHGAP26Q9UNA1 814 aa6.99□□□□□ -1.29
CUBNP3-201ENST00000457461 USTQ9Y2C2 406 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms