RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 TLL2Q9Y6L7 1015 aa17.07■□□□□ 0.32
CCDC43-202ENST00000457422 A8MUI8 341 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 TPP1O14773 563 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 IRAK2O43187 625 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 WFS1O76024 890 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 USP1O94782 785 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 HAUS5O94927 633 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 GSRP00390 522 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 PTPN4P29074 926 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 HTR7P34969 479 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 CAP1Q01518 475 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 TSPY1Q01534 308 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 PDE1CQ14123 709 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 INSCQ1MX18 579 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 BRMS1LQ5PSV4 323 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 GRTP1Q5TC63 336 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 CES4AQ5XG92 561 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 SCAMP5Q8TAC9 235 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 ATP2A3Q93084 1043 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 RNF34Q969K3 372 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 ISL2Q96A47 359 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 TLE6Q9H808 572 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 FNDC1Q4ZHG4 1894 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 MYL2P10916 166 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 PRKAR2AP13861 404 aaKnown RBP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 SERPINB3P29508 390 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 HOXC13P31276 330 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 COG7P83436 770 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 PREPLQ4J6C6 727 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 CELF6Q96J87 481 aaKnown RBP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 FCRL3Q96P31 734 aaPredicted RBP17.06■□□□□ 0.32
CCDC43-202ENST00000457422 TSGA13Q96PP4 275 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 HAPLN3Q96S86 360 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 ABCC13Q9NSE7 274 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 DCDC2Q9UHG0 476 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 ADAM28Q9UKQ2 775 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 EMCNQ9ULC0 261 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 NOD1Q9Y239 953 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 THSD7BQ9C0I4 1608 aa17.06■□□□□ 0.32
CCDC43-202ENST00000457422 ZCWPW2A0A1B0GU75 182 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 MAGEB16A2A368 324 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 AP3B1O00203 1094 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 CACNG3O60359 315 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 ERVK-10P10266 1014 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 NFKB1P19838 968 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 MAGEA12P43365 314 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 NPY2RP49146 381 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 KRT72Q14CN4 511 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 C4orf50Q6ZRC1 276 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 PCSK9Q8NBP7 692 aaKnown RBP17.05■□□□□ 0.32
CCDC43-202ENST00000457422 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.05■□□□□ 0.32
CCDC43-202ENST00000457422 TBC1D10AQ9BXI6 508 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 SMOC2Q9H3U7 446 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 TXNDC16Q9P2K2 825 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 PCDHB8Q9UN66 801 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 FAM237BA0A1B0GVD1 139 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 TNFRSF10BO14763 440 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 PLIN3O60664 434 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 ELNP15502 786 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 CCND1P24385 295 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 DNAJB2P25686 324 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 SLC5A3P53794 718 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 DNAAF3Q8N9W5 541 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 AGAP11Q8TF27 550 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 ZNF669Q96BR6 464 aaPredicted RBP17.05■□□□□ 0.32
CCDC43-202ENST00000457422 PTCD3Q96EY7 689 aaKnown RBP17.05■□□□□ 0.32
CCDC43-202ENST00000457422 THAP1Q9NVV9 213 aa17.05■□□□□ 0.32
CCDC43-202ENST00000457422 RPL26L1Q9UNX3 145 aaKnown RBP17.05■□□□□ 0.32
CCDC43-202ENST00000457422 C2orf71A6NGG8 1288 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 ARHGAP42A6NI28 874 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 PSMD3O43242 534 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 B4GALT3O60512 393 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 ATP5BP06576 529 aaKnown RBP17.04■□□□□ 0.32
CCDC43-202ENST00000457422 ITGA7Q13683 1181 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 ANKRD20A4Q4UJ75 823 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 N4BP2L1Q5TBK1 243 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-202ENST00000457422 MANEALQ5VSG8 457 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 RWDD4Q6NW29 188 aaKnown RBP17.04■□□□□ 0.32
CCDC43-202ENST00000457422 CRLF3Q8IUI8 442 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 RBBP8Q99708 897 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 IL22Q9GZX6 179 aa17.04■□□□□ 0.32
CCDC43-202ENST00000457422 FBXO6Q9NRD1 293 aaPredicted RBP17.04■□□□□ 0.32
CCDC43-202ENST00000457422 TMEM88BA6NKF7 163 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 FGF10O15520 208 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 SRGAP2BP0DMP2 458 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 CCNCP24863 283 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 SPRP35270 261 aaPredicted RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 PGFP49763 221 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 IRX4P78413 519 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 PDE1BQ01064 536 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 ZBTB16Q05516 673 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 STX3Q13277 289 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 PRPSAP1Q14558 356 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 FASTKD1Q53R41 847 aaKnown RBP17.03■□□□□ 0.32
CCDC43-202ENST00000457422 MBLAC2Q68D91 279 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 C16orf46Q6P387 395 aa17.03■□□□□ 0.32
CCDC43-202ENST00000457422 SPATA2LQ8IUW3 424 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms