RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 AAGABQ6PD74 315 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 TMEM110Q86TL2 294 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 LINC01465Q8N7H1 131 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 C17orf50Q8WW18 174 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 STRIP2Q9ULQ0 834 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 EFR3BQ9Y2G0 817 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 NME7Q9Y5B8 376 aa13.91□□□□□ -0.18
TOP3B-213ENST00000457179 ZMPSTE24O75844 475 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ALDH1A3P47895 512 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 YWHAGP61981 247 aaKnown RBP eCLIP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 HTRA3P83110 453 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 BST1Q10588 318 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 MORF4L2Q15014 288 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 EFHC2Q5JST6 749 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 MORN1Q5T089 497 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 C6orf52Q5T4I8 152 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ZNF467Q7Z7K2 595 aaPredicted RBP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ZNF410Q86VK4 478 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 TRPV1Q8NER1 839 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 PEBP4Q96S96 227 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 BCO2Q9BYV7 579 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 WWP1Q9H0M0 922 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 PCDH9Q9HC56 1237 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 DDX56Q9NY93 547 aaKnown RBP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ITGA11Q9UKX5 1188 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 PPME1Q9Y570 386 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 CDY2AQ9Y6F7 541 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 LOC100653049A0A140TA62 436 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 LSM1O15116 133 aaKnown RBP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 PRPSAP2O60256 369 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 KRT34O76011 436 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 TGDSO95455 350 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 PAX3P23760 479 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 GRM5P41594 1212 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ATXN3P54252 364 aaPredicted RBP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 C9orf57Q5W0N0 161 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 WSCD1Q658N2 575 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 C17orf99Q6UX52 265 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ZCCHC23Q6ZST2 131 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 CTAGE3PQ8IX95 158 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 SLC35B2Q8TB61 432 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 CFAP36Q96G28 342 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 TRIM56Q9BRZ2 755 aaKnown RBP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 MRPS26Q9BYN8 205 aaKnown RBP13.9□□□□□ -0.18
TOP3B-213ENST00000457179 SLC13A1Q9BZW2 595 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ARMC7Q9H6L4 198 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 TMPRSS4Q9NRS4 437 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 ST3GAL5Q9UNP4 418 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 AP4B1Q9Y6B7 739 aa13.9□□□□□ -0.18
TOP3B-213ENST00000457179 HTR3EA5X5Y0 456 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 C3orf70A6NLC5 250 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CYB561D2O14569 222 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 MCF2LO15068 1137 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 ALOX15BO15296 676 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 HUS1O60921 280 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 KRT7P08729 469 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 VDRP11473 427 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PHBP35232 272 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PURAQ00577 322 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 NME3Q13232 169 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PTK7Q13308 1070 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CHI3L2Q15782 390 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 GDF6Q6KF10 455 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 NANOGNBQ7Z5D8 188 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 IGDCC3Q8IVU1 814 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 APPL2Q8NEU8 664 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 IRGQQ8WZA9 623 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 EMID1Q96A84 441 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 ZFRQ96KR1 1074 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 WDR83Q9BRX9 315 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 KCNK4Q9NYG8 393 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 MAGED2Q9UNF1 606 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 MAD1L1Q9Y6D9 718 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 DNAJA2O60884 412 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 AKR1A1P14550 325 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 MYBPC1Q00872 1141 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 ENPEPQ07075 957 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 TRNP1Q6NT89 227 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 KYAT3Q6YP21 454 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 FAM131BQ86XD5 332 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CXorf38Q8TB03 319 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PPP4R1Q8TF05 950 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 TMIGD2Q96BF3 282 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 DCUN1D5Q9BTE7 237 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 NFKBIZQ9BYH8 718 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CEP41Q9BYV8 373 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 SPC25Q9HBM1 224 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 ANLNQ9NQW6 1124 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 KIAA0100Q14667 2235 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PRRC2BQ5JSZ5 2229 aaKnown RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 PEX1O43933 1283 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 FAM155BO75949 473 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 TNFAIP8O95379 198 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CRTAMO95727 393 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CDH2P19022 906 aaPredicted RBP13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CD52P31358 61 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 NDUFV1P49821 464 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 SCNN1GP51170 649 aa13.89□□□□□ -0.19
TOP3B-213ENST00000457179 CAP1Q01518 475 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms