RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 PTP4A2Q12974 167 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 FUT11Q495W5 492 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 SLC36A4Q6YBV0 504 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 PHLDB2Q86SQ0 1253 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 TXLNBQ8N3L3 684 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 EMC1Q8N766 993 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 CTNNBL1Q8WYA6 563 aaPredicted RBP18.29■□□□□ 0.52
COPS7A-202ENST00000455113 MYEOVQ96EZ4 313 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 VCPIP1Q96JH7 1222 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 ARRDC1-AS1Q9H2J1 176 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 PRDM16Q9HAZ2 1276 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 SEMA4GQ9NTN9 838 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 SUN2Q9UH99 717 aa18.29■□□□□ 0.52
COPS7A-202ENST00000455113 OTOGLQ3ZCN5 2332 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 EP300Q09472 2414 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-202ENST00000455113 THADAQ6YHU6 1953 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-202ENST00000455113 PJA2O43164 708 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 EPN2O95208 641 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 TFE3P19532 575 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-202ENST00000455113 GSCP56915 257 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-202ENST00000455113 CREB5Q02930 508 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 LMNB2Q03252 620 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 KIF5AQ12840 1032 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 ZNF177Q13360 481 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-202ENST00000455113 CDO1Q16878 200 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 PMS2CLQ68D20 193 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 REXO1L1PQ8IX06 675 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 C3orf20Q8ND61 904 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 RXFP2Q8WXD0 754 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 PRCCQ92733 491 aaPredicted RBP18.28■□□□□ 0.52
COPS7A-202ENST00000455113 ZNF653Q96CK0 615 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 TRIM11Q96F44 468 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 MRGPRX1Q96LB2 322 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 KCND1Q9NSA2 647 aa18.28■□□□□ 0.52
COPS7A-202ENST00000455113 SDK1Q7Z5N4 2213 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 CCP110O43303 1012 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 CLDN11O75508 207 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 MYBL1P10243 752 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 CSKP41240 450 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 DHPSP49366 369 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-202ENST00000455113 SULT2A1Q06520 285 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 CSRP2Q16527 193 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 PITRM1Q5JRX3 1037 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 SPDYCQ5MJ68 293 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 DNAJC24Q6P3W2 148 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 TMPRSS6Q8IU80 811 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 C12orf50Q8NA57 414 aaPredicted RBP18.27■□□□□ 0.52
COPS7A-202ENST00000455113 TTC17Q96AE7 1141 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 SIPA1Q96FS4 1042 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 FBRSQ9HAH7 460 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 LZTFL1Q9NQ48 299 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 TRIM10Q9UDY6 481 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 DUSP10Q9Y6W6 482 aa18.27■□□□□ 0.52
COPS7A-202ENST00000455113 ATMINO43313 823 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-202ENST00000455113 NDUFS2O75306 463 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 HLA-EP13747 358 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 RRM1P23921 792 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 PRKCHP24723 683 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ARHGAP25P42331 645 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 CDH4P55283 916 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 RPL6Q02878 288 aaKnown RBP18.26■□□□□ 0.51
COPS7A-202ENST00000455113 MAP7D1Q3KQU3 841 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 PLEKHG6Q3KR16 790 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 OTUD1Q5VV17 481 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-202ENST00000455113 DCUN1D2Q6PH85 259 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ZNF662Q6ZS27 426 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 FAM131BQ86XD5 332 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ARHGEF26Q96DR7 871 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 C1orf74Q96LT6 269 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 HAPLN3Q96S86 360 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 TMEM245Q9H330 911 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 CNOT8Q9UFF9 292 aaKnown RBP18.26■□□□□ 0.51
COPS7A-202ENST00000455113 CYP8B1Q9UNU6 501 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 PRR5-ARHGAP8B1AHC4 643 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 SRPRAP08240 638 aaKnown RBP18.26■□□□□ 0.51
COPS7A-202ENST00000455113 GPD1P21695 349 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 SDHBP21912 280 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 BCKDHBP21953 392 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 GGCXP38435 758 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 MPLP40238 635 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ARHGAP8P85298 464 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ECT2LQ008S8 904 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 PTPRNQ16849 979 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 STRADAQ7RTN6 431 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 CIR1Q86X95 450 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-202ENST00000455113 OR2T3Q8NH03 318 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 IGSF8Q969P0 613 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ADAM33Q9BZ11 813 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 TSGA10Q9BZW7 698 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 CD248Q9HCU0 757 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 MYO1AQ9UBC5 1043 aa18.26■□□□□ 0.51
COPS7A-202ENST00000455113 ABCA7Q8IZY2 2146 aa18.25■□□□□ 0.51
COPS7A-202ENST00000455113 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.25■□□□□ 0.51
COPS7A-202ENST00000455113 C2CD4BA6NLJ0 364 aa18.25■□□□□ 0.51
COPS7A-202ENST00000455113 SIGLEC16A6NMB1 481 aa18.25■□□□□ 0.51
COPS7A-202ENST00000455113 KRT86O43790 486 aa18.25■□□□□ 0.51
COPS7A-202ENST00000455113 CYP1A2P05177 515 aa18.25■□□□□ 0.51
COPS7A-202ENST00000455113 MSNP26038 577 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms