RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 CACNA2D2Q9NY47 1150 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 RAPGEFL1Q9UHV5 662 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 STON1Q9Y6Q2 735 aa28.77■■■□□ 2.2
SMARCC1-203ENST00000454240 WASH3PC4AMC7 463 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 OR1E1P30953 314 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 IL12RB1P42701 662 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 WASP42768 502 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 SLC25A11Q02978 314 aaKnown RBP28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 PTPRNQ16849 979 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 BOLA3Q53S33 107 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 SDE2Q6IQ49 451 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 CAMKK1Q8N5S9 505 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 CYB5D2Q8WUJ1 264 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 EPAS1Q99814 870 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 IRF2BPLQ9H1B7 796 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 DHX35Q9H5Z1 703 aaKnown RBP28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 TMEM248Q9NWD8 314 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 PLA2G4CQ9UP65 541 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 REXO2Q9Y3B8 237 aaKnown RBP28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 ARIH1Q9Y4X5 557 aaPredicted RBP28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 CKAP5Q14008 2032 aa28.76■■■□□ 2.19
SMARCC1-203ENST00000454240 CREB3O43889 395 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 ASLP04424 464 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 RHOCP08134 193 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 HTR7P34969 479 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 ARHGAP25P42331 645 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 DGKEP52429 567 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 C6orf118Q5T5N4 469 aa28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 RNF219Q5W0B1 726 aaPredicted RBP28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 FAM126AQ9BYI3 521 aaPredicted RBP28.75■■■□□ 2.19
SMARCC1-203ENST00000454240 A0A1W2PQF6 199 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 IPO7O95373 1038 aaKnown RBP28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 HOXB2P14652 356 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 EPHB2P29323 1055 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 MAN1A1P33908 653 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 HADHBP55084 474 aaKnown RBP28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 TXNRD3NBQ6F5E7 133 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 ZNF783Q6ZMS7 281 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 CPNE8Q86YQ8 564 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 TEKT4Q8WW24 435 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 HHIPQ96QV1 700 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 KCTD15Q96SI1 283 aaPredicted RBP28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 TMEM245Q9H330 911 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 CD248Q9HCU0 757 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 TFR2Q9UP52 801 aa28.74■■■□□ 2.19
SMARCC1-203ENST00000454240 ILVBLA1L0T0 632 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 RARAP10276 462 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 MAPKAPK2P49137 400 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 NRLP54845 237 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 MESDQ14696 234 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 KCNT1Q5JUK3 1230 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 MYO19Q96H55 970 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 MRGPRX3Q96LB0 322 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 MUC3BQ9H195 1237 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 ZWILCHQ9H900 591 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 NDFIP2Q9NV92 336 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 EML5Q05BV3 1969 aa28.73■■■□□ 2.19
SMARCC1-203ENST00000454240 MUC6Q6W4X9 2439 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 A0A0A6YYK5 440 aaPredicted RBP28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 WASH4PA8MWX3 477 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 CTSOP43234 321 aaPredicted RBP28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 MRE11P49959 708 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 ZNF135P52742 658 aaPredicted RBP28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 ECT2LQ008S8 904 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 SULT2A1Q06520 285 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 DMWDQ09019 674 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 DPYSL2Q16555 572 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 HADHQ16836 314 aaKnown RBP28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 SMTNL2Q2TAL5 461 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 KDM1BQ8NB78 822 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 ACRBPQ8NEB7 543 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 TSTD1Q8NFU3 115 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 PSMB7Q99436 277 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 POLMQ9NP87 494 aaPredicted RBP28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 ERVW-1Q9UQF0 538 aa28.72■■■□□ 2.19
SMARCC1-203ENST00000454240 A0A0D9SEW6 157 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 CCDC163A0A0D9SF12 145 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 RCCD1A6NED2 376 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 APBB3O95704 486 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 SRPRAP08240 638 aaKnown RBP28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 PRKCHP24723 683 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 TPI1P60174 286 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 FNDC3BQ53EP0 1204 aaKnown RBP28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 SERPINA13PQ6UXR4 307 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 RTL3Q8N8U3 475 aaKnown RBP28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 ZBTB44Q8NCP5 570 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 CATSPERBQ9H7T0 1116 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 ZSCAN32Q9NX65 697 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 EBF1Q9UH73 591 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 DNAI1Q9UI46 699 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 VPS28Q9UK41 221 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 RAD54BQ9Y620 910 aa28.71■■■□□ 2.19
SMARCC1-203ENST00000454240 CACNA1HO95180 2353 aa28.7■■■□□ 2.19
SMARCC1-203ENST00000454240 TMEM110-MUSTN1A8MSY1 372 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 EEF2KO00418 725 aaKnown RBP28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 FGF10O15520 208 aaPredicted RBP28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 SSR1P43307 286 aaKnown RBP28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 HCAR3P49019 387 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 NUMBP49757 651 aa28.7■■■□□ 2.18
SMARCC1-203ENST00000454240 VASPP50552 380 aaPredicted RBP28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms