RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 CCDC185Q8N715 623 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 TSTD1Q8NFU3 115 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 TTC17Q96AE7 1141 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 LOXL4Q96JB6 756 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 GABRG3Q99928 467 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 ARRDC1-AS1Q9H2J1 176 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 OR12D3Q9UGF7 316 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 EBF1Q9UH73 591 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 INTS6Q9UL03 887 aaKnown RBP20.54■□□□□ 0.88
COL9A3-202ENST00000452372 ACACBO00763 2458 aa20.54■□□□□ 0.88
COL9A3-202ENST00000452372 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 SLC30A4O14863 429 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 SRGAP2O75044 1071 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 CNTN5O94779 1100 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 ATP5BP06576 529 aaKnown RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 HOXB2P14652 356 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 POLR2EP19388 210 aaKnown RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 WASP42768 502 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 AIF1P55008 147 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 OXCT1P55809 520 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 ZNF252P-AS1Q0IIN9 211 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 ALFQ53S48 1182 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 CXorf57Q6NSI4 855 aaKnown RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 SORCS1Q8WY21 1168 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 DUSP15Q9H1R2 295 aaPredicted RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 POLMQ9NP87 494 aaPredicted RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 CACNA2D2Q9NY47 1150 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 PPARGC1AQ9UBK2 798 aaKnown RBP20.53■□□□□ 0.88
COL9A3-202ENST00000452372 PLA2G4CQ9UP65 541 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 TBC1D30Q9Y2I9 924 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 STON1Q9Y6Q2 735 aa20.53■□□□□ 0.88
COL9A3-202ENST00000452372 WASH3PC4AMC7 463 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 DCLK1O15075 740 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 RNF8O76064 485 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 EPN2O95208 641 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 MOCS3O95396 460 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 DLDP09622 509 aaKnown RBP20.52■□□□□ 0.88
COL9A3-202ENST00000452372 IL12RB1P42701 662 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 PLK1P53350 603 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 ZNF234Q14588 700 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 SF3A2Q15428 464 aaKnown RBP20.52■□□□□ 0.88
COL9A3-202ENST00000452372 CCDC6Q16204 474 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 PLEKHG6Q3KR16 790 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 FUT11Q495W5 492 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 PLK5Q496M5 336 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 PITRM1Q5JRX3 1037 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 PLA2G2CQ5R387 149 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 ARFGAP1Q8N6T3 406 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 NETO1Q8TDF5 533 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 ARHGEF26Q96DR7 871 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 PPP1R9BQ96SB3 815 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 NCAPGQ9BPX3 1015 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 MAGEB5Q9BZ81 275 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 ZYG11BQ9C0D3 744 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 RXFP3Q9NSD7 469 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 MPP6Q9NZW5 540 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 FZD10Q9ULW2 581 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 EPG5Q9HCE0 2579 aa20.52■□□□□ 0.88
COL9A3-202ENST00000452372 A0A1W2PQF6 199 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 ALDH1A2O94788 518 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 ASLP04424 464 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 H2AFZP0C0S5 128 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 ZNF806P0C7X5 589 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 CSKP41240 450 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 ACAP1Q15027 740 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 PTPRNQ16849 979 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 MANEALQ5VSG8 457 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 H2AFVQ71UI9 128 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 RASSF3Q86WH2 238 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 APCDD1Q8J025 514 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 CYB5D2Q8WUJ1 264 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 NUP85Q9BW27 656 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 RETREG1Q9H6L5 497 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 CD248Q9HCU0 757 aa20.51■□□□□ 0.87
COL9A3-202ENST00000452372 NUP205Q92621 2012 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 FAM72CH0Y354 149 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 MZF1P28698 734 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-202ENST00000452372 CDC25BP30305 580 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 L1CAMP32004 1257 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 PIGHQ14442 188 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-202ENST00000452372 EFHC2Q5JST6 749 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 FAM72AQ5TYM5 149 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 FAM72DQ6L9T8 149 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 SETD3Q86TU7 594 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-202ENST00000452372 FAM72BQ86X60 149 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 CTNNBL1Q8WYA6 563 aaPredicted RBP20.5■□□□□ 0.87
COL9A3-202ENST00000452372 ALG14Q96F25 216 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 PANX2Q96RD6 677 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 FEM1AQ9BSK4 669 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 PACSIN1Q9BY11 444 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 TMEM245Q9H330 911 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 SPTLC3Q9NUV7 552 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 ZNF212Q9UDV6 495 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 THADAQ6YHU6 1953 aa20.5■□□□□ 0.87
COL9A3-202ENST00000452372 CHD8Q9HCK8 2581 aa20.49■□□□□ 0.87
COL9A3-202ENST00000452372 TM4SF5O14894 197 aa20.49■□□□□ 0.87
COL9A3-202ENST00000452372 LRCH4O75427 683 aa20.49■□□□□ 0.87
COL9A3-202ENST00000452372 LRIG2O94898 1065 aa20.49■□□□□ 0.87
COL9A3-202ENST00000452372 MIPP30301 263 aa20.49■□□□□ 0.87
COL9A3-202ENST00000452372 SULT2A1Q06520 285 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms