RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 ADH1AP07327 375 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 APRTP07741 180 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 SPATA31D3P0C874 917 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 TAC1P20366 129 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 KCNA5P22460 613 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 OR1D2P34982 312 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 MSH2P43246 934 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 YWHAHQ04917 246 aaPredicted RBP11.02□□□□□ -0.65
PKP4-206ENST00000452162 SCAPQ12770 1279 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 SEMA5AQ13591 1074 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 PRKD1Q15139 912 aaPredicted RBP11.02□□□□□ -0.65
PKP4-206ENST00000452162 SPRED3Q2MJR0 410 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 CTXN3Q4LDR2 81 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 LACTB2Q53H82 288 aaPredicted RBP11.02□□□□□ -0.65
PKP4-206ENST00000452162 SPATA31D4Q6ZUB0 917 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 TFB1MQ8WVM0 346 aaKnown RBP11.02□□□□□ -0.65
PKP4-206ENST00000452162 MYLPFQ96A32 169 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 NTAN1Q96AB6 310 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 SMARCD1Q96GM5 515 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 PKMYT1Q99640 499 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 CSNK1G1Q9HCP0 422 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 COX16Q9P0S2 106 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 BACE2Q9Y5Z0 518 aa11.02□□□□□ -0.65
PKP4-206ENST00000452162 TGM5O43548 720 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 OAZ2O95190 189 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 TYMPP19971 482 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 PAX3P23760 479 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 RPA3P35244 121 aaPredicted RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 ADRA1BP35368 520 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 AIF1P55008 147 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 YWHAGP61981 247 aaKnown RBP eCLIP11.01□□□□□ -0.65
PKP4-206ENST00000452162 IL9RQ01113 521 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 SEMA3BQ13214 749 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 NME3Q13232 169 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 PAFAH1B3Q15102 231 aaKnown RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 NUGGCQ68CJ6 796 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 HEATR6Q6AI08 1181 aaKnown RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 OVOS1Q6IE37 1185 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 FAM171BQ6P995 826 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 BZW1Q7L1Q6 419 aaKnown RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 ANKS4BQ8N8V4 417 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 SLC44A1Q8WWI5 657 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 HTR3CQ8WXA8 447 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 LRRC39Q96DD0 335 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 PGAP3Q96FM1 320 aaPredicted RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 RHOBTB2Q9BYZ6 727 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 ANLNQ9NQW6 1124 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 ZNF638Q14966 1978 aaKnown RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 C2orf16Q68DN1 1984 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 A0A0A0MRY4 1105 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 CCT8L1PA6NM43 557 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 I6L893 689 aaPredicted RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 DCLK1O15075 740 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 LTFP02788 710 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 USP17L7P0C7H9 530 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 ARPP19P56211 112 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 CREMQ03060 361 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 KBTBD12Q3ZCT8 623 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 INTS6LQ5JSJ4 861 aaKnown RBP11.01□□□□□ -0.65
PKP4-206ENST00000452162 ZNF280DQ6N043 979 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 LILRA6Q6PI73 481 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 TMEM184AQ6ZMB5 413 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 RGS9BPQ6ZS82 235 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 CFAP36Q96G28 342 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 SPATA13Q96N96 652 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 TMEM209Q96SK2 561 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 LGMNQ99538 433 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 ACBD6Q9BR61 282 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 KDM4CQ9H3R0 1056 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 GRID1Q9ULK0 1009 aa11.01□□□□□ -0.65
PKP4-206ENST00000452162 PATJQ8NI35 1801 aa11□□□□□ -0.65
PKP4-206ENST00000452162 H7C4K7 107 aa11□□□□□ -0.65
PKP4-206ENST00000452162 GLUD1P00367 558 aa11□□□□□ -0.65
PKP4-206ENST00000452162 OR4Q2P0C623 313 aa11□□□□□ -0.65
PKP4-206ENST00000452162 KRT4P19013 534 aa11□□□□□ -0.65
PKP4-206ENST00000452162 CA4P22748 312 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ACTN3Q08043 901 aaPredicted RBP11□□□□□ -0.65
PKP4-206ENST00000452162 RAB33AQ14088 237 aa11□□□□□ -0.65
PKP4-206ENST00000452162 SPARCL1Q14515 664 aa11□□□□□ -0.65
PKP4-206ENST00000452162 SLC1A5Q15758 541 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ANKRD20A2Q5SQ80 823 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ANKRD20A1Q5TYW2 823 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ANKRD20A3Q5VUR7 823 aa11□□□□□ -0.65
PKP4-206ENST00000452162 SLC8B1Q6J4K2 584 aa11□□□□□ -0.65
PKP4-206ENST00000452162 CGB2Q6NT52 195 aa11□□□□□ -0.65
PKP4-206ENST00000452162 RFX8Q6ZV50 586 aa11□□□□□ -0.65
PKP4-206ENST00000452162 PRPF39Q86UA1 669 aaKnown RBP11□□□□□ -0.65
PKP4-206ENST00000452162 METTL23Q86XA0 190 aa11□□□□□ -0.65
PKP4-206ENST00000452162 C12orf76Q8N812 135 aaPredicted RBP11□□□□□ -0.65
PKP4-206ENST00000452162 OR10T2Q8NGX3 314 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ADAM32Q8TC27 787 aa11□□□□□ -0.65
PKP4-206ENST00000452162 SIGLEC10Q96LC7 697 aa11□□□□□ -0.65
PKP4-206ENST00000452162 APOL5Q9BWW9 433 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ACTR5Q9H9F9 607 aaPredicted RBP11□□□□□ -0.65
PKP4-206ENST00000452162 RRN3Q9NYV6 651 aa11□□□□□ -0.65
PKP4-206ENST00000452162 ZC3H7BQ9UGR2 993 aaKnown RBP11□□□□□ -0.65
PKP4-206ENST00000452162 FBXW11Q9UKB1 542 aa11□□□□□ -0.65
PKP4-206ENST00000452162 USP15Q9Y4E8 981 aaPredicted RBP11□□□□□ -0.65
PKP4-206ENST00000452162 WDR27A2RRH5 827 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms