RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 PABPC3Q9H361 631 aaKnown RBP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 ARHGEF38Q9NXL2 777 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 SERGEFQ9UGK8 458 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 NOCTQ9UK39 431 aaKnown RBP12.86□□□□□ -0.35
CPSF4-208ENST00000452047 VANGL2Q9ULK5 521 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 SCML1Q9UN30 329 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 CACNA1BQ00975 2339 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 TMEM131Q92545 1883 aa12.86□□□□□ -0.35
CPSF4-208ENST00000452047 EDDM13A0A1B0GTR0 161 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 FAM170AA1A519 330 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 C10orf142B7Z368 130 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 ADCY5O95622 1261 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 FLT3P36888 993 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SULT1E1P49888 294 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 RNASE9P60153 205 aaKnown RBP12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SLC14A1Q13336 389 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SLC25A52Q3SY17 297 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 C2CD6Q53TS8 623 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 BRMS1LQ5PSV4 323 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 ARTNQ5T4W7 220 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 FAM102AQ5T9C2 384 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-208ENST00000452047 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 C14orf80Q86SX3 495 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 ERICH1Q86X53 443 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SLC20A1Q8WUM9 679 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 PTPRN2Q92932 1015 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 BIRC7Q96CA5 298 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 FAM129BQ96TA1 746 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 TBCBQ99426 244 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 ORAI3Q9BRQ5 295 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 TKTL2Q9H0I9 626 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SLC32A1Q9H598 525 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SGK2Q9HBY8 427 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 FAM207AQ9NSI2 230 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-208ENST00000452047 FANCLQ9NW38 375 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 TMEM59LQ9UK28 342 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 STAP1Q9ULZ2 295 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 SIK3Q9Y2K2 1263 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 OR51B4Q9Y5P0 310 aa12.85□□□□□ -0.35
CPSF4-208ENST00000452047 KNL1Q8NG31 2342 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 MID1O15344 667 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 RNASEH1O60930 286 aaKnown RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 CLDN11O75508 207 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 GFPT2O94808 682 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 IGHV4-34P06331 123 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 VAV1P15498 845 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 AFF3P51826 1226 aaKnown RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 OXCT1P55809 520 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 POLR2FP61218 127 aaKnown RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 MYL5Q02045 173 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 SULT2A1Q06520 285 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 ELAVL3Q14576 367 aaKnown RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 NAA35Q5VZE5 725 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 RNF219Q5W0B1 726 aaPredicted RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 ZNF677Q86XU0 584 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
CPSF4-208ENST00000452047 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 AADATQ8N5Z0 425 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 FRS2Q8WU20 508 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 CPA5Q8WXQ8 436 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 SNX19Q92543 992 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 FEM1AQ9BSK4 669 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 WDCPQ9H6R7 721 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 OSGEPQ9NPF4 335 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 ANO10Q9NW15 660 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 FBXL12Q9NXK8 326 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 ADAMTS1Q9UHI8 967 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 FZD4Q9ULV1 537 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 TBC1D30Q9Y2I9 924 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 DAAM1Q9Y4D1 1078 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 DMXL2Q8TDJ6 3036 aa12.84□□□□□ -0.35
CPSF4-208ENST00000452047 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 SPAARA0A1B0GVQ0 90 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 A0A1W2PP55 124 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 LGALS16A8MUM7 142 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 GOLGA8SH3BPF8 625 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 ATP9BO43861 1147 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CNTN5O94779 1100 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 F9P00740 461 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CYP1A1P04798 512 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 ZNF18P17022 549 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CHRNB2P17787 502 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CD27P26842 260 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 SLC8A1P32418 973 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 SOX5P35711 763 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 COPB1P53618 953 aaKnown RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CDH4P55283 916 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 FAM193AP78312 1265 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 FMO1Q01740 532 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 CDR2Q01850 454 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 DEUP1Q05D60 604 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 FOXC1Q12948 553 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 ZNF177Q13360 481 aaPredicted RBP12.83□□□□□ -0.36
CPSF4-208ENST00000452047 STX1AQ16623 288 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 ALFQ53S48 1182 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 FKBP15Q5T1M5 1219 aa12.83□□□□□ -0.36
CPSF4-208ENST00000452047 SASS6Q6UVJ0 657 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 278.6 ms