RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 RFFLQ8WZ73 363 aa8.66□□□□□ -1.02
HCG18-238ENST00000449544 POLR1EQ9GZS1 481 aaKnown RBP8.66□□□□□ -1.02
HCG18-238ENST00000449544 SIRPGQ9P1W8 387 aa8.66□□□□□ -1.02
HCG18-238ENST00000449544 PCDHB3Q9Y5E6 796 aa8.66□□□□□ -1.02
HCG18-238ENST00000449544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 ZNF840PA6NDX5 716 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 PPP1R3GB7ZBB8 358 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 SCAMP1O15126 338 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 COCHO43405 550 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 CST8O60676 142 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 C4BPAP04003 597 aaKnown RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 ALDH4A1P30038 563 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 ADSSP30520 456 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 GALCP54803 685 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 TMPRSS15P98073 1019 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 FOXM1Q08050 763 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 FOXC1Q12948 553 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 TRIP13Q15645 432 aaPredicted RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 FAM183BPQ6ZVS7 135 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 ALYREFQ86V81 257 aaKnown RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 PDIK1LQ8N165 341 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 IL22RA1Q8N6P7 574 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 OVCA2Q8WZ82 227 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 RAPGEF5Q92565 580 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 TRIM56Q9BRZ2 755 aaKnown RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 UTP6Q9NYH9 597 aaKnown RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 TLK1Q9UKI8 766 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 YJEFN3A6XGL0 299 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 KCNU1A8MYU2 1149 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 E7ENQ6 273 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 INPP4BO15327 924 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 RRP8O43159 456 aaKnown RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 VIPP01282 170 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 MCM3P25205 808 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 ZNF135P52742 658 aaPredicted RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 SESN2P58004 480 aaPredicted RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 DAOAP59103 153 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 DSC1Q08554 894 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 SPEM2Q0P670 501 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 BMT2Q1RMZ1 405 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 TSSK4Q6SA08 328 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 PPHLN1Q8NEY8 458 aaKnown RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 GPT2Q8TD30 523 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 TRAIPQ9BWF2 469 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 SLC46A2Q9BY10 475 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 OSBPL6Q9BZF3 934 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 EVLQ9UI08 416 aaPredicted RBP8.65□□□□□ -1.02
HCG18-238ENST00000449544 ARHGAP26Q9UNA1 814 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 SRCAPQ6ZRS2 3230 aa8.65□□□□□ -1.02
HCG18-238ENST00000449544 PHIPQ8WWQ0 1821 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 CSKP41240 450 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 GEMP55040 296 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 CDH4P55283 916 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 SIM1P81133 766 aaPredicted RBP8.65□□□□□ -1.03
HCG18-238ENST00000449544 ANGPT1Q15389 498 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 WDR59Q6PJI9 974 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 CLEC20AQ6ZU45 233 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 FUKQ8N0W3 1084 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 DTWD2Q8NBA8 298 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 EXT2Q93063 718 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 EIF2B4Q9UI10 523 aaKnown RBP8.65□□□□□ -1.03
HCG18-238ENST00000449544 PCDHA13Q9Y5I0 950 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 TRPM7Q96QT4 1865 aa8.65□□□□□ -1.03
HCG18-238ENST00000449544 CABIN1Q9Y6J0 2220 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 EP400Q96L91 3159 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 NPC1O15118 1278 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 TM7SF2O76062 418 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 SEC24AO95486 1093 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 CER1O95813 267 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 SLC2A4P14672 509 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 GJA4P35212 333 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 C1QBPQ07021 282 aaKnown RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 PTK2BQ14289 1009 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 SMAD1Q15797 465 aaKnown RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 E2F4Q16254 413 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 PHYKPLQ8IUZ5 450 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 C1orf210Q8IVY1 113 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 CRYBG2Q8N1P7 616 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 TTC9BQ8N6N2 239 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 TERB1Q8NA31 727 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 CDC26Q8NHZ8 85 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 LMX1AQ8TE12 382 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 NAPGQ99747 312 aaPredicted RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 FTSJ1Q9UET6 329 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 AGO1Q9UL18 857 aaKnown RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 SCML2Q9UQR0 700 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 HPSEQ9Y251 543 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 A0A1W2PQC6 194 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 ECI2O75521 394 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 SEMA4FO95754 770 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 CALCAP01258 141 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 MRPS21P82921 87 aaKnown RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 PDK2Q15119 407 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 FASTKD1Q53R41 847 aaKnown RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 ANKRD20A8PQ5CZ79 823 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 TMTC4Q5T4D3 741 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 BROXQ5VW32 411 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 C8orf74Q6P047 294 aa8.64□□□□□ -1.03
HCG18-238ENST00000449544 RAB44Q7Z6P3 723 aaPredicted RBP8.64□□□□□ -1.03
HCG18-238ENST00000449544 SPEM1Q8N4L4 309 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms