RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 RAB6BQ9NRW1 208 aa8.32□□□□□ -1.08
LINC00954-202ENST00000449086 CNTN3Q9P232 1028 aa8.32□□□□□ -1.08
LINC00954-202ENST00000449086 ZC3H7BQ9UGR2 993 aaKnown RBP8.32□□□□□ -1.08
LINC00954-202ENST00000449086 ZNF180Q9UJW8 692 aa8.32□□□□□ -1.08
LINC00954-202ENST00000449086 PADI3Q9ULW8 664 aa8.32□□□□□ -1.08
LINC00954-202ENST00000449086 TBX20Q9UMR3 447 aa8.32□□□□□ -1.08
LINC00954-202ENST00000449086 DRG1Q9Y295 367 aaKnown RBP8.32□□□□□ -1.08
LINC00954-202ENST00000449086 A0A0B4J269 797 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 F5H423 210 aaPredicted RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ITM2AO43736 263 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TSPAN1O60635 241 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 DNAJA2O60884 412 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 APRTP07741 180 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ITGB8P26012 769 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CDKN2BP42772 138 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 MRPS5P82675 430 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 KYAT1Q16773 422 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 NOTUMQ6P988 496 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 FRMD7Q6ZUT3 714 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CATSPER4Q7RTX7 472 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PQLC1Q8N2U9 271 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ZBTB8BQ8NAP8 495 aaPredicted RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PIWIL2Q8TC59 973 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 SPATA18Q8TC71 538 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 JADE3Q92613 823 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 BADQ92934 168 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 DHRS4Q9BTZ2 278 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 MTIF3Q9H2K0 278 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CAAP1Q9H8G2 361 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TIMMDC1Q9NPL8 285 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ST3GAL5Q9UNP4 418 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TNFSF13BQ9Y275 285 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 H7C0C1 242 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 INO80B-WBP1J3KQ70 363 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 MCF2LO15068 1137 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 HLA-DRAP01903 254 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 FAM58BPP0C7Q3 252 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PSMA2P25787 234 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 SERPINB5P36952 375 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ATP5OP48047 213 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 NUDT2P50583 147 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CCL23P55773 120 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 OGDHQ02218 1023 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 GCNT1Q02742 428 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 SLC18A2Q05940 514 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TBCCQ15814 346 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 DCAF4L1Q3SXM0 396 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 FASTKD1Q53R41 847 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 KCTD6Q8NC69 237 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PPP4R1Q8TF05 950 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 USP13Q92995 863 aaPredicted RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TMIGD2Q96BF3 282 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 C1orf21Q9H246 121 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TSPYL2Q9H2G4 693 aaPredicted RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ELAC1Q9H777 363 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 MINDY3Q9H8M7 445 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 RGS18Q9NS28 235 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PNPOQ9NVS9 261 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 STYXL1Q9Y6J8 313 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 COL4A6Q14031 1691 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 SDR42E2A6NKP2 422 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PIK3R2O00459 728 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 KLHL2O95198 593 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CSF2RAP15509 400 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PROZP22891 400 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CD52P31358 61 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PKNOX1P55347 436 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 MYBPC1Q00872 1141 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CYP24A1Q07973 514 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 IKBKEQ14164 716 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PDPK2PQ6A1A2 396 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 SLFN12LQ6IEE8 588 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PLEKHA7Q6IQ23 1121 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CASC4Q6P4E1 433 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 NPNTQ6UXI9 565 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 LPCAT2Q7L5N7 544 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 TAS1R3Q7RTX0 852 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ADGRG6Q86SQ4 1221 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PHTF2Q8N3S3 785 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CCDC33Q8N5R6 958 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 EMC1Q8N766 993 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 GIPC3Q8TF64 312 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 HERVK_113Q902F9 699 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ZNF516Q92618 1163 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 NKD2Q969F2 451 aaPredicted RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 CMTM5Q96DZ9 223 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 SCLYQ96I15 445 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 ZFRQ96KR1 1074 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 AGO3Q9H9G7 860 aaKnown RBP8.31□□□□□ -1.08
LINC00954-202ENST00000449086 RRN3Q9NYV6 651 aa8.31□□□□□ -1.08
LINC00954-202ENST00000449086 PTPRJQ12913 1337 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 GOLGA8QA0A0J9YX86 632 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 GOLGA8OA6NCC3 632 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 GOLGA8NF8WBI6 632 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 NEMP1O14524 444 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 ZNF623O75123 536 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 KRT38O76015 456 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 PDGFRBP09619 1106 aa8.3□□□□□ -1.08
LINC00954-202ENST00000449086 AOC1P19801 751 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms