RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 CMTM5Q96DZ9 223 aa13.98□□□□□ -0.17
POLR1B-209ENST00000448770 MFSD3Q96ES6 412 aa13.98□□□□□ -0.17
POLR1B-209ENST00000448770 GATA5Q9BWX5 397 aaPredicted RBP13.98□□□□□ -0.17
POLR1B-209ENST00000448770 EIF2AQ9BY44 585 aaKnown RBP13.98□□□□□ -0.17
POLR1B-209ENST00000448770 C15orf38-AP3S2A0A0A6YYH1 394 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 IRF6O14896 467 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 XRCC1P18887 633 aaPredicted RBP13.97□□□□□ -0.17
POLR1B-209ENST00000448770 FOLH1Q04609 750 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 MMEL1Q495T6 779 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ANKRD20A4Q4UJ75 823 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ARHGAP17Q68EM7 881 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ARPINQ7Z6K5 226 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 TMEM151AQ8N4L1 468 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 CCNYQ8ND76 341 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 RNF139Q8WU17 664 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 NAT14Q8WUY8 206 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 NLRP7Q8WX94 980 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ATP2A3Q93084 1043 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 MARK4Q96L34 752 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 APOL2Q9BQE5 337 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 DMAP1Q9NPF5 467 aaPredicted RBP13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ERAP1Q9NZ08 941 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 SSX2IPQ9Y2D8 614 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 A0A096LPK6 155 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 TK2O00142 265 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 AIM2O14862 343 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 CREB3O43889 395 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 BEST1O76090 585 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 HSPA4LO95757 839 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 MYL4P12829 197 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 EPHA3P29320 983 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 RPL34P49207 117 aaKnown RBP13.97□□□□□ -0.17
POLR1B-209ENST00000448770 SULT1E1P49888 294 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 LIMK2P53671 638 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ATXN3P54252 364 aaPredicted RBP13.97□□□□□ -0.17
POLR1B-209ENST00000448770 PAOXQ6QHF9 649 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 SNX32Q86XE0 403 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 ST13P4Q8IZP2 240 aaPredicted RBP13.97□□□□□ -0.17
POLR1B-209ENST00000448770 LILRA2Q8N149 483 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 RNF148Q8N7C7 305 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 TDRD5Q8NAT2 981 aaKnown RBP13.97□□□□□ -0.17
POLR1B-209ENST00000448770 SLC2A14Q8TDB8 520 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 DCUN1D1Q96GG9 259 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 EPAS1Q99814 870 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 RBPJLQ9UBG7 517 aa13.97□□□□□ -0.17
POLR1B-209ENST00000448770 SBF1O95248 1867 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 CCDC78A2IDD5 438 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 HACD1B0YJ81 288 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 STX16-NPEPL1H3BU86 382 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 ARSAP15289 507 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 IGFBP6P24592 240 aaPredicted RBP13.96□□□□□ -0.17
POLR1B-209ENST00000448770 PIK3R1P27986 724 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 HOXA11P31270 313 aaPredicted RBP13.96□□□□□ -0.17
POLR1B-209ENST00000448770 ALDH1A3P47895 512 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 GLUD2P49448 558 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 NDUFV1P49821 464 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 SLC26A2P50443 739 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 NUDT2P50583 147 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 MS4A2Q01362 244 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 TMEM62Q0P6H9 643 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 BST2Q10589 180 aaKnown RBP13.96□□□□□ -0.17
POLR1B-209ENST00000448770 ZBTB6Q15916 424 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 HSP90AA5PQ58FG0 334 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 CERCAMQ5T4B2 595 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 SYPL2Q5VXT5 272 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 MAMDC4Q6UXC1 1216 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 HFE2Q6ZVN8 426 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 CPNE1Q99829 537 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 RTKNQ9BST9 563 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 MCMBPQ9BTE3 642 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.96□□□□□ -0.17
POLR1B-209ENST00000448770 ARHGAP26Q9UNA1 814 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 AK5Q9Y6K8 562 aa13.96□□□□□ -0.17
POLR1B-209ENST00000448770 A0A1B0GTW7 788 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 DNAJA2O60884 412 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 C2P06681 752 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 POLBP06746 335 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 MX2P20592 715 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 CD68P34810 354 aaPredicted RBP13.96□□□□□ -0.18
POLR1B-209ENST00000448770 ARL4AP40617 200 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 GRM5P41594 1212 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 PKNOX1P55347 436 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 MRPS22P82650 360 aaKnown RBP13.96□□□□□ -0.18
POLR1B-209ENST00000448770 POU5F1BQ06416 359 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 LSAMPQ13449 338 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 NAB1Q13506 487 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 CTU1Q7Z7A3 348 aaKnown RBP13.96□□□□□ -0.18
POLR1B-209ENST00000448770 ZDHHC17Q8IUH5 632 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 PQLC1Q8N2U9 271 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 METTL25Q8N6Q8 603 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 NPWQ8N729 165 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 ANKRD52Q8NB46 1076 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 CENPKQ9BS16 269 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 CCDC28BQ9BUN5 200 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 MLPHQ9BV36 600 aaPredicted RBP13.96□□□□□ -0.18
POLR1B-209ENST00000448770 GOLGA2P5Q9HBQ8 144 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 CLIC5Q9NZA1 410 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 DTNAQ9Y4J8 743 aa13.96□□□□□ -0.18
POLR1B-209ENST00000448770 CLDN5O00501 218 aa13.95□□□□□ -0.18
POLR1B-209ENST00000448770 GRID2O43424 1007 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms