RNA–Protein interactions for RNA: ENST00000448549.1

TRA2A-203, Transcript of transformer 2 alpha homolog, humanhuman

TSL 4

Gene TRA2A, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-203ENST00000448549 ADH1BP00325 375 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 IL1BP01584 269 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 VAV1P15498 845 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 PDGFRAP16234 1089 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 C5AR1P21730 350 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 MZF1P28698 734 aaPredicted RBP16.03■□□□□ 0.16
TRA2A-203ENST00000448549 GNA15P30679 374 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 CCR5P51681 352 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 ADPRHP54922 357 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 MARSP56192 900 aaKnown RBP16.03■□□□□ 0.16
TRA2A-203ENST00000448549 EIF4EBP2Q13542 120 aaPredicted RBP16.03■□□□□ 0.16
TRA2A-203ENST00000448549 CAMK2BQ13554 666 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 SHBQ15464 509 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 MEA1Q16626 185 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 PDZD3Q86UT5 571 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 CCAR2Q8N163 923 aaKnown RBP16.03■□□□□ 0.16
TRA2A-203ENST00000448549 ATP6V0D2Q8N8Y2 350 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 SERAC1Q96JX3 654 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 PRMT1Q99873 361 aaKnown RBP16.03■□□□□ 0.16
TRA2A-203ENST00000448549 FAM204AQ9H8W3 233 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 DKK4Q9UBT3 224 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 ATRXP46100 2492 aa16.03■□□□□ 0.16
TRA2A-203ENST00000448549 SYNJ2BP-COX16A0A087WUM0 186 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3DA0A087WVF3 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3IA0A087WXS9 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3EA0A087X179 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3KA0A087X1G2 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 A0A1W2PR77 199 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3FA6NER0 549 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3LB9A6J9 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 CBX4O00257 560 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 ITGAVP06756 1048 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3HP0C7X1 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 ABCB4P21439 1286 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 NNMTP40261 264 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 METAP1P53582 386 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 PAK1Q13153 545 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 PDCLQ13371 301 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 SLC12A1Q13621 1099 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 ELAVL3Q14576 367 aaKnown RBP16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3GQ6DHY5 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3CQ6IPX1 549 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 GJB7Q6PEY0 223 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-203ENST00000448549 TBC1D3Q8IZP1 549 aaPredicted RBP16.02■□□□□ 0.16
TRA2A-203ENST00000448549 SAP25Q8TEE9 199 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 CRACR2AQ9BSW2 395 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 GDF3Q9NR23 364 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 DDIT4Q9NX09 232 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 COX16Q9P0S2 106 aa16.02■□□□□ 0.16
TRA2A-203ENST00000448549 PLK4O00444 970 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 DRD3P35462 400 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 USP8P40818 1118 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 PPP2CBP62714 309 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 PPP2CAP67775 309 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 CDK17Q00537 523 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 APBA1Q02410 837 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 SULT2A1Q06520 285 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 FBXL22Q6P050 247 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 ENOSF1Q7L5Y1 443 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 DEFB106AQ8N104 65 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 WDTC1Q8N5D0 677 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 PDCD7Q8N8D1 485 aaKnown RBP16.01■□□□□ 0.15
TRA2A-203ENST00000448549 FRS2Q8WU20 508 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 RNF34Q969K3 372 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 SPAG5Q96R06 1193 aa16.01■□□□□ 0.15
TRA2A-203ENST00000448549 ANKRD11Q6UB99 2663 aaPredicted RBP16■□□□□ 0.15
TRA2A-203ENST00000448549 A0A1B0GVM2 712 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 TCAF2A6NFQ2 919 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 BECN2A8MW95 431 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 TLR4O00206 839 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 ENC1O14682 589 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 RTN2O75298 545 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 GRAP2O75791 330 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 LDOC1O95751 146 aaPredicted RBP16■□□□□ 0.15
TRA2A-203ENST00000448549 SLC2A3P11169 496 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 SLC9A1P19634 815 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 CCR1P32246 355 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 PLK1P53350 603 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 CLDN6P56747 220 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 NXPH1P58417 271 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 CENPCQ03188 943 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 DNAJC3Q13217 504 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 ACAP1Q15027 740 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 ARHGAP44Q17R89 818 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 ACCSLQ4AC99 568 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 RABGAP1LQ5R372 815 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 TTC39BQ5VTQ0 682 aaPredicted RBP16■□□□□ 0.15
TRA2A-203ENST00000448549 CXorf57Q6NSI4 855 aaKnown RBP16■□□□□ 0.15
TRA2A-203ENST00000448549 TRIM65Q6PJ69 517 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 CREBRFQ8IUR6 639 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 EID2Q8N6I1 236 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 LRIG1Q96JA1 1093 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 CNDP2Q96KP4 475 aaKnown RBP16■□□□□ 0.15
TRA2A-203ENST00000448549 PPP1R13BQ96KQ4 1090 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 RPRD1AQ96P16 312 aaPredicted RBP16■□□□□ 0.15
TRA2A-203ENST00000448549 SLC2A13Q96QE2 648 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 CPXM1Q96SM3 734 aa16■□□□□ 0.15
TRA2A-203ENST00000448549 SARDHQ9UL12 918 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms