RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 ZNF677Q86XU0 584 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 XYLT1Q86Y38 959 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 MMAAQ8IVH4 418 aaKnown RBP20.29■□□□□ 0.84
VCP-203ENST00000448530 EPS8L1Q8TE68 723 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 IGSF8Q969P0 613 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 SPAG5Q96R06 1193 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 OMDQ99983 421 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 TKTL2Q9H0I9 626 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 GANQ9H2C0 597 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 SLC25A13Q9UJS0 675 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.29■□□□□ 0.84
VCP-203ENST00000448530 DAAM1Q9Y4D1 1078 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 CHD8Q9HCK8 2581 aa20.29■□□□□ 0.84
VCP-203ENST00000448530 MBD3O95983 291 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
VCP-203ENST00000448530 MZF1P28698 734 aaPredicted RBP20.28■□□□□ 0.84
VCP-203ENST00000448530 GGCXP38435 758 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 CXCR3P49682 368 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 NUMBP49757 651 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 STK19P49842 368 aaPredicted RBP20.28■□□□□ 0.84
VCP-203ENST00000448530 AFF3P51826 1226 aaKnown RBP20.28■□□□□ 0.84
VCP-203ENST00000448530 MYL5Q02045 173 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 TEAD4Q15561 434 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 SLC25A52Q3SY17 297 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 CXorf57Q6NSI4 855 aaKnown RBP20.28■□□□□ 0.84
VCP-203ENST00000448530 IL27RAQ6UWB1 636 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 LRRC31Q6UY01 552 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 PIP4P1Q86T03 277 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 CPA5Q8WXQ8 436 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 NLRC4Q9NPP4 1024 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 VPS28Q9UK41 221 aa20.28■□□□□ 0.84
VCP-203ENST00000448530 NYNRINQ9P2P1 1898 aaKnown RBP20.28■□□□□ 0.84
VCP-203ENST00000448530 FAM47DPA6NHR8 397 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 MID1O15344 667 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 RNASEH2AO75792 299 aaKnown RBP20.27■□□□□ 0.84
VCP-203ENST00000448530 ADCY5O95622 1261 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 CER1O95813 267 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 ZNF18P17022 549 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 SLC8A1P32418 973 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 SOX5P35711 763 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 PSMD8P48556 350 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 KLK7P49862 253 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 CDH4P55283 916 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 NOMO3P69849 1222 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 HNRNPDQ14103 355 aaKnown RBP20.27■□□□□ 0.84
VCP-203ENST00000448530 ELAVL3Q14576 367 aaKnown RBP20.27■□□□□ 0.84
VCP-203ENST00000448530 ACCSLQ4AC99 568 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 ACBD5Q5T8D3 534 aaPredicted RBP20.27■□□□□ 0.84
VCP-203ENST00000448530 OTUD1Q5VV17 481 aaPredicted RBP20.27■□□□□ 0.84
VCP-203ENST00000448530 STK40Q8N2I9 435 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 BIRC7Q96CA5 298 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 PGAP3Q96FM1 320 aaPredicted RBP20.27■□□□□ 0.84
VCP-203ENST00000448530 TBCBQ99426 244 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 FEM1AQ9BSK4 669 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 MUC3BQ9H195 1237 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 ARHGEF38Q9NXL2 777 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 PCNX2A6NKB5 2137 aa20.27■□□□□ 0.84
VCP-203ENST00000448530 A0A1W2PP55 124 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 LRRC72A6NJI9 287 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 ADH1BP00325 375 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 IL1BP01584 269 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 CD59P13987 128 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 TFE3P19532 575 aaPredicted RBP20.26■□□□□ 0.83
VCP-203ENST00000448530 CD27P26842 260 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 RDXP35241 583 aaKnown RBP20.26■□□□□ 0.83
VCP-203ENST00000448530 STAT1P42224 750 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 COPB1P53618 953 aaKnown RBP20.26■□□□□ 0.83
VCP-203ENST00000448530 SIM1P81133 766 aaPredicted RBP20.26■□□□□ 0.83
VCP-203ENST00000448530 CDR2Q01850 454 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 C2CD6Q53TS8 623 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 CCDC183Q5T5S1 534 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 KIAA0895LQ68EN5 471 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 DSG4Q86SJ6 1040 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 C14orf80Q86SX3 495 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 NEK11Q8NG66 645 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 SLC20A1Q8WUM9 679 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 NT5C3BQ969T7 300 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 GAREM1Q9H706 876 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 NOCTQ9UK39 431 aaKnown RBP20.26■□□□□ 0.83
VCP-203ENST00000448530 FZD4Q9ULV1 537 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 PCDHB9Q9Y5E1 797 aa20.26■□□□□ 0.83
VCP-203ENST00000448530 SPAARA0A1B0GVQ0 90 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 A0A1B0GVT2 93 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 RHOCP08134 193 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 C5AR1P21730 350 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 FLT3P36888 993 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 CSNK1EP49674 416 aaKnown RBP20.25■□□□□ 0.83
VCP-203ENST00000448530 IRAK1P51617 712 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 SYCP1Q15431 976 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 C5orf22Q49AR2 442 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 TRIM72Q6ZMU5 477 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 ADAT2Q7Z6V5 191 aaKnown RBP20.25■□□□□ 0.83
VCP-203ENST00000448530 C1orf216Q8TAB5 229 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 PTPRN2Q92932 1015 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 FAM129BQ96TA1 746 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 NEUROG2Q9H2A3 272 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 OSGEPQ9NPF4 335 aa20.25■□□□□ 0.83
VCP-203ENST00000448530 LIMA1Q9UHB6 759 aaKnown RBP20.25■□□□□ 0.83
VCP-203ENST00000448530 LGALS16A8MUM7 142 aa20.24■□□□□ 0.83
VCP-203ENST00000448530 GJB3O75712 270 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms