RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 C14orf80Q86SX3 495 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 KBTBD6Q86V97 674 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 OR2T3Q8NH03 318 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 NTAN1Q96AB6 310 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 SIPA1Q96FS4 1042 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 C2orf49Q9BVC5 232 aaPredicted RBP16.84■□□□□ 0.29
SF3A1-204ENST00000447376 OSBPL2Q9H1P3 480 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 TMEM245Q9H330 911 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 PPARGC1AQ9UBK2 798 aaKnown RBP16.84■□□□□ 0.29
SF3A1-204ENST00000447376 ERVW-1Q9UQF0 538 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 INVSQ9Y283 1065 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 MYO18AQ92614 2054 aaKnown RBP16.84■□□□□ 0.29
SF3A1-204ENST00000447376 PIEZO1Q92508 2521 aa16.84■□□□□ 0.29
SF3A1-204ENST00000447376 ATMINO43313 823 aaPredicted RBP16.83■□□□□ 0.28
SF3A1-204ENST00000447376 LRP3O75074 770 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 NDUFS2O75306 463 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 HLA-EP13747 358 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 PRKCHP24723 683 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 ETFBP38117 255 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 PLK1P53350 603 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 HDAC4P56524 1084 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 PLK5Q496M5 336 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 PPP1R15BQ5SWA1 713 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 SH3PXD2AQ5TCZ1 1133 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 TMPRSS6Q8IU80 811 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 RLN3Q8WXF3 142 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 TBC1D31Q96DN5 1066 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 MRGPRX1Q96LB2 322 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 CHP1Q99653 195 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 EPAS1Q99814 870 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 DUSP15Q9H1R2 295 aaPredicted RBP16.83■□□□□ 0.28
SF3A1-204ENST00000447376 GRPEL1Q9HAV7 217 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 INTS6Q9UL03 887 aaKnown RBP16.83■□□□□ 0.28
SF3A1-204ENST00000447376 USP18Q9UMW8 372 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 TBC1D30Q9Y2I9 924 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 PCDHGA5Q9Y5G8 931 aa16.83■□□□□ 0.28
SF3A1-204ENST00000447376 MYO15AQ9UKN7 3530 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 IGLV3-10A0A075B6K4 115 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 EDDM13A0A1B0GTR0 161 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 TCRBV5S1A1TA0A578 114 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 DRGXA6NNA5 263 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 DCLK1O15075 740 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 DNTTP04053 509 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 DPP6P42658 865 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 DHPSP49366 369 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 NRG1Q02297 640 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 CAMK2GQ13555 558 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 PTPRNQ16849 979 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 ASTE1Q2TB18 679 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 TTC31Q49AM3 519 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 SPDYCQ5MJ68 293 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 CXorf57Q6NSI4 855 aaKnown RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 ZNF783Q6ZMS7 281 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 TFAP2DQ7Z6R9 452 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 METTL3Q86U44 580 aaKnown RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 TMTC1Q8IUR5 882 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 CCDC170Q8IYT3 715 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 APCDD1Q8J025 514 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 ZNF366Q8N895 744 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 SPC24Q8NBT2 197 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 CTNNBL1Q8WYA6 563 aaPredicted RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 LMLNQ96KR4 655 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 FEM1AQ9BSK4 669 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 LUC7LQ9NQ29 371 aaKnown RBP16.82■□□□□ 0.28
SF3A1-204ENST00000447376 ANLNQ9NQW6 1124 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 TMPRSS4Q9NRS4 437 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 DONSONQ9NYP3 566 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 MPP6Q9NZW5 540 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 CYP8B1Q9UNU6 501 aa16.82■□□□□ 0.28
SF3A1-204ENST00000447376 TARSL2A2RTX5 802 aaKnown RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 TMEM191CA6NGB0 347 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 PRPSAP2O60256 369 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 CNTN5O94779 1100 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 EPN2O95208 641 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 IPO7O95373 1038 aaKnown RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 H2AFZP0C0S5 128 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 MZF1P28698 734 aaPredicted RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 OXTRP30559 389 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 CYLC1P35663 651 aaPredicted RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 GSDMDP57764 484 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 RPL6Q02878 288 aaKnown RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 ZBTB16Q05516 673 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 SCAPQ12770 1279 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 SPA17Q15506 151 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 HNRNPA1L2Q32P51 320 aaKnown RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 ACCSLQ4AC99 568 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 ALFQ53S48 1182 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 PMS2CLQ68D20 193 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 ZNF776Q68DI1 518 aaPredicted RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 H2AFVQ71UI9 128 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 CYP2U1Q7Z449 544 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 KIAA2013Q8IYS2 634 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 CCDC185Q8N715 623 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 FNIP1Q8TF40 1166 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 ANP32BQ92688 251 aaKnown RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 RPL10LQ96L21 214 aaKnown RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 CCDC114Q96M63 670 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 SCML1Q9UN30 329 aa16.81■□□□□ 0.28
SF3A1-204ENST00000447376 FARP1Q9Y4F1 1045 aaPredicted RBP16.81■□□□□ 0.28
SF3A1-204ENST00000447376 SNX10Q9Y5X0 201 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms