RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 SERPINI1Q99574 410 aa19.51■□□□□ 0.71
SDCBP-204ENST00000447182 CEP41Q9BYV8 373 aa19.51■□□□□ 0.71
SDCBP-204ENST00000447182 CXCL16Q9H2A7 254 aa19.51■□□□□ 0.71
SDCBP-204ENST00000447182 PDGFCQ9NRA1 345 aa19.51■□□□□ 0.71
SDCBP-204ENST00000447182 VPS28Q9UK41 221 aa19.51■□□□□ 0.71
SDCBP-204ENST00000447182 A0A096LPK6 155 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 ADORA2BP29275 332 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 ALDH1A3P47895 512 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 SULT1E1P49888 294 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 CLCN2P51788 898 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 RPS6KA3P51812 740 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 HK2P52789 917 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 ARHGAP1Q07960 439 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 LSAMPQ13449 338 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 KCTD2Q14681 263 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 FBXL19Q6PCT2 694 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 BNIPLQ7Z465 357 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 SLC16A10Q8TF71 515 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 CNKSR2Q8WXI2 1034 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 SNX27Q96L92 541 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 SEPT10Q9P0V9 454 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 MID2Q9UJV3 735 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 INPP5FQ9Y2H2 1132 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 DTNAQ9Y4J8 743 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 LTBP3Q9NS15 1303 aa19.5■□□□□ 0.71
SDCBP-204ENST00000447182 ZCWPW2A0A1B0GU75 182 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-204ENST00000447182 FBXO21O94952 628 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 AP2A1O95782 977 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 GRAMD1BQ3KR37 738 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 C16orf89Q6UX73 402 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 DEFB106AQ8N104 65 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 EFCAB3Q8N7B9 438 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 CCNYQ8ND76 341 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 BEST2Q8NFU1 509 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 OR52K1Q8NGK4 314 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 NAT14Q8WUY8 206 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 NT5C3BQ969T7 300 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 ZNF669Q96BR6 464 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-204ENST00000447182 OR52B2Q96RD2 323 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 MCMBPQ9BTE3 642 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 OXSMQ9NWU1 459 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 TUBGCP4Q9UGJ1 667 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 E2F8A0AVK6 867 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 RGSL1A5PLK6 1076 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 MATN2O00339 956 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 DPYSQ14117 519 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 OTUD1Q5VV17 481 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-204ENST00000447182 PID1Q7Z2X4 250 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 TMC7Q7Z402 723 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 URGCPQ8TCY9 931 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 DTNBP1Q96EV8 351 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 ILKAPQ9H0C8 392 aaPredicted RBP19.49■□□□□ 0.71
SDCBP-204ENST00000447182 NMRAL1Q9HBL8 299 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 VANGL2Q9ULK5 521 aa19.49■□□□□ 0.71
SDCBP-204ENST00000447182 ZNF638Q14966 1978 aaKnown RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 A0A0G2JLL6 359 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 HCRTO43612 131 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 TIMM44O43615 452 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 DAB1O75553 588 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 APOA4P06727 396 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 PIK3R1P27986 724 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 CSE1LP55060 971 aaKnown RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 LAMC2Q13753 1193 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 SMAD1Q15797 465 aaKnown RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 ZFP1Q6P2D0 407 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 PRRT2Q7Z6L0 340 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 RP9Q8TA86 221 aaKnown RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 KBTBD7Q8WVZ9 684 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 GATA5Q9BWX5 397 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 CASS4Q9NQ75 786 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 BFARQ9NZS9 450 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 RAP2CQ9Y3L5 183 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 C15orf38-AP3S2A0A0A6YYH1 394 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 DCLK1O15075 740 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 C2P06681 752 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 ADSLP30566 484 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 CSRP3P50461 194 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 IRF9Q00978 393 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 SLC5A9Q2M3M2 681 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 C9orf57Q5W0N0 161 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 ARPINQ7Z6K5 226 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 SETD3Q86TU7 594 aaPredicted RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 ZNF410Q86VK4 478 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 CPSF7Q8N684 471 aaKnown RBP19.48■□□□□ 0.71
SDCBP-204ENST00000447182 KYQ8NBH2 561 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 NETO2Q8NC67 525 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 RDH11Q8TC12 318 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 AGAP2Q99490 1192 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 TXNRD2Q9NNW7 524 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 SNTG2Q9NY99 539 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 RAD54BQ9Y620 910 aa19.48■□□□□ 0.71
SDCBP-204ENST00000447182 CAPN8A6NHC0 703 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 ERI2A8K979 691 aaKnown RBP19.47■□□□□ 0.71
SDCBP-204ENST00000447182 HDAC3O15379 428 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 SMIM18P0DKX4 95 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 GNL1P36915 607 aaPredicted RBP19.47■□□□□ 0.71
SDCBP-204ENST00000447182 HADHAP40939 763 aa19.47■□□□□ 0.71
SDCBP-204ENST00000447182 PRKAA2P54646 552 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms