RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 OPTCQ9UBM4 332 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 KLHL20Q9Y2M5 609 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ASB3Q9Y575 518 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 PCDHA2Q9Y5H9 948 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ESYT3A0FGR9 886 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 SMIM11AP58511 58 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CDR2LQ86X02 465 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 FBXO36Q8NEA4 188 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ZNF670Q9BS34 389 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 C11orf84Q9BUA3 381 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 OSBPL10Q9BXB5 764 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 BRD9Q9H8M2 597 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 RCOR3Q9P2K3 495 aaPredicted RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 FAM86B1E9PN63 330 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 FAM86B2P0C5J1 330 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 NR6A1Q15406 480 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 TXNDC11Q6PKC3 985 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 R3HCC1LQ7Z5L2 792 aaKnown RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 RBM12Q9NTZ6 932 aaKnown RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 XPO1O14980 1071 aaKnown RBP8.7□□□□□ -1.02
PTPN3-204ENST00000446349 PSMD10O75832 226 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 CPA3P15088 417 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 GPR1P46091 355 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 RAP1GAPP47736 663 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 COPZ1P61923 177 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 SPRYD7Q5W111 196 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 ULK2Q8IYT8 1036 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 DEFB118Q96PH6 123 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 TSC22D3Q99576 134 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 DPY30Q9C005 99 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 TAF6LQ9Y6J9 622 aa8.7□□□□□ -1.02
PTPN3-204ENST00000446349 PRR23D1E9PI22 279 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ACSL4O60488 711 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 RPSAP08865 295 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 PRR23D2P0DMB1 279 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 TYMPP19971 482 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 DDX39BQ13838 428 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 PCID2Q5JVF3 399 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 TRPM8Q7Z2W7 1104 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 TRAPPC5Q8IUR0 188 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 C12orf56Q8IXR9 622 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ERVW-1Q9UQF0 538 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 Q9Y3F1 56 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 A0A087X0T9 212 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 LRRC14BA6NHZ5 514 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 H3BNH8 94 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 CLDN11O75508 207 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 USP1O94782 785 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ANXA6P08133 673 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 FAM228BP0C875 321 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 CLCN5P51795 746 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 CAPRIN2Q6IMN6 1127 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 KIAA1324Q6UXG2 1013 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 C1orf186Q6ZWK4 172 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 POLNQ7Z5Q5 900 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 GPSM1Q86YR5 675 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 DEFB106AQ8N104 65 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 VGLL2Q8N8G2 317 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 RFWD2Q8NHY2 731 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 INPP5DQ92835 1189 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 SEMA6BQ9H3T3 888 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 DDX20Q9UHI6 824 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 E7ENQ6 273 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 AIM2O14862 343 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ICAM3P32942 547 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 BEX3Q00994 111 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 NOL9Q5SY16 702 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 STAG3L4Q8TBR4 150 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 CHAMP1Q96JM3 812 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 GPR20Q99678 358 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 NDUFA13Q9P0J0 144 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 MORF4L1Q9UBU8 362 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 POLD2P49005 469 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ZNF143P52747 638 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 PARP15Q460N3 678 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 NDOR1Q9UHB4 597 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 FARP2O94887 1054 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 OR6A2O95222 327 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 HIST1H2ABP04908 130 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 LSP1P33241 339 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 CLK1P49759 484 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 FOXD4Q12950 439 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 AAK1Q2M2I8 961 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 HIST3H2AQ7L7L0 130 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ACTRT2Q8TDY3 377 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 HIST1H2ACQ93077 130 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 KAZALD1Q96I82 304 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 UGT2B28Q9BY64 529 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 BATF3Q9NR55 127 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ABI3Q9P2A4 366 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 TRPC4Q9UBN4 977 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 COLEC10Q9Y6Z7 277 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 MRC1P22897 1456 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 ATMINO43313 823 aaPredicted RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 CNOT3O75175 753 aaKnown RBP8.69□□□□□ -1.02
PTPN3-204ENST00000446349 FGF1P05230 155 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 DAB2P98082 770 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 SLC29A2Q14542 456 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 LRRC14Q15048 493 aa8.69□□□□□ -1.02
PTPN3-204ENST00000446349 WDR93Q6P2C0 686 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms