RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 ZNF813Q6ZN06 617 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 CCDC129Q6ZRS4 1044 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 ANKS1BQ7Z6G8 1248 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 DNAJC10Q8IXB1 793 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 GOLGA1Q92805 767 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZNF845Q96IR2 970 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 HS6ST2Q96MM7 605 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 CCDC68Q9H2F9 335 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 FLRT1Q9NZU1 646 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 TBX20Q9UMR3 447 aa4.9□□□□□ -1.63
HMGB1P48-201ENST00000446155 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 FAM90A20PA6NIJ5 464 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 MBD3L5A6NJ08 208 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 EFCAB8A8MWE9 144 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 B4DLN1 442 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 TMEM232C9JQI7 657 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 RRHO14718 337 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CNPP09543 421 aaKnown RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CHMP24386 653 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 IDUAP35475 653 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 STAT6P42226 847 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 TAS2R50P59544 299 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 RBM6P78332 1123 aaKnown RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CBFBQ13951 182 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 ANKRD1Q15327 319 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 GALNTL6Q49A17 601 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CFAP58Q5T655 872 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 MFSD4BQ5TF39 518 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 ATG16L1Q676U5 607 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 B4GALNT4Q76KP1 1039 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 TFAP2DQ7Z6R9 452 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CHD1LQ86WJ1 897 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 RFX6Q8HWS3 928 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 NKAIN3Q8N8D7 197 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 EXD3Q8N9H8 876 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC2A12Q8TD20 617 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 IGFBPL1Q8WX77 278 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 REXO5Q96IC2 774 aaKnown RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 NPAS1Q99742 590 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 GHITMQ9H3K2 345 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CCDC134Q9H6E4 229 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 ELAC1Q9H777 363 aaKnown RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 NOD2Q9HC29 1040 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 MLXIPLQ9NP71 852 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 G6PC2Q9NQR9 355 aa4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 TRPC5Q9UL62 973 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 RRP7AQ9Y3A4 280 aaKnown RBP4.89□□□□□ -1.63
HMGB1P48-201ENST00000446155 CYP3A7-CYP3A51PA0A087WV96 503 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 MASP2O00187 686 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 KRT38O76015 456 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 AKR1B1P15121 316 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 ALOX12P18054 663 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 CYP3A7P24462 503 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 CCR9P51686 369 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 ARF3P61204 181 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 ARF1P84077 181 aaKnown RBP4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 ZBED6P86452 979 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 FOXF2Q12947 444 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 TBRG1Q3YBR2 411 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 ANKRD40Q6AI12 368 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 WDR93Q6P2C0 686 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 TTC30BQ8N4P2 665 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 HMGB4Q8WW32 186 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 C3orf49Q96BT1 292 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 C5orf34Q96MH7 638 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 CRAMP1Q96RY5 1269 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 REEP2Q9BRK0 252 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 ACAD9Q9H845 621 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 LIN7CQ9NUP9 197 aaKnown RBP4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 TBC1D29Q9UFV1 150 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 VPS28Q9UK41 221 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 RAB21Q9UL25 225 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 B3GNT3Q9Y2A9 372 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 CNPY2Q9Y2B0 182 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 DERAQ9Y315 318 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 CYP46A1Q9Y6A2 500 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 SPATA31A5Q5VU36 1347 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 SPATA31A7Q8IWB4 1347 aa4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 TDRD9Q8NDG6 1382 aaKnown RBP4.88□□□□□ -1.63
HMGB1P48-201ENST00000446155 C3orf70A6NLC5 250 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 E7EVH7 732 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SPTLC2O15270 562 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 P4HA2O15460 535 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 HEXIM1O94992 359 aaKnown RBP4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 TUBB4AP04350 444 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 CSF1P09603 554 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 RFPL3SP0C7P2 107 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 PEPDP12955 493 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SERPINA4P29622 427 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC8A1P32418 973 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SLC37A1P57057 533 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 DCTN1Q14203 1278 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 SMAD1Q15797 465 aaKnown RBP4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 COLEC12Q5KU26 742 aa4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 MEX3CQ5U5Q3 659 aaKnown RBP4.87□□□□□ -1.63
HMGB1P48-201ENST00000446155 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms