RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 SIK2Q9H0K1 926 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 RSPH9Q9H1X1 276 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 METTL5Q9NRN9 209 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 KIAA1522Q9P206 1035 aaPredicted RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 EIF2B4Q9UI10 523 aaKnown RBP11.21□□□□□ -0.61
SF3A1-203ENST00000444440 CEP83Q9Y592 693 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 OR51B4Q9Y5P0 310 aa11.21□□□□□ -0.61
SF3A1-203ENST00000444440 ZFHX4Q86UP3 3567 aa11.21□□□□□ -0.62
SF3A1-203ENST00000444440 TRPM6Q9BX84 2022 aa11.21□□□□□ -0.62
SF3A1-203ENST00000444440 MYLKQ15746 1914 aa11.21□□□□□ -0.62
SF3A1-203ENST00000444440 CHD8Q9HCK8 2581 aa11.21□□□□□ -0.62
SF3A1-203ENST00000444440 KMT2BQ9UMN6 2715 aaPredicted RBP11.2□□□□□ -0.62
SF3A1-203ENST00000444440 SHROOM3Q8TF72 1996 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 MEI4A8MW99 385 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 C10orf142B7Z368 130 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 RNF103O00237 685 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 PLK4O00444 970 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 ARHGAP33O14559 1287 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 MID1O15344 667 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 TEX33O43247 280 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 LSM8O95777 96 aaKnown RBP11.2□□□□□ -0.62
SF3A1-203ENST00000444440 ASLP04424 464 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 SRPRAP08240 638 aaKnown RBP11.2□□□□□ -0.62
SF3A1-203ENST00000444440 SLC2A3P11169 496 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 CD59P13987 128 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 PMLP29590 882 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 SCNN1AP37088 669 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 FAM193AP78312 1265 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 ECT2LQ008S8 904 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 CDR2Q01850 454 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 TYRO3Q06418 890 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 GRIK2Q13002 908 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 SEMA3BQ13214 749 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 DAB2IPQ5VWQ8 1189 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 LAYNQ6UX15 382 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 MMAAQ8IVH4 418 aaKnown RBP11.2□□□□□ -0.62
SF3A1-203ENST00000444440 STK40Q8N2I9 435 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 AADATQ8N5Z0 425 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF557Q8N988 423 aaPredicted RBP11.2□□□□□ -0.62
SF3A1-203ENST00000444440 CADM4Q8NFZ8 388 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 JOSD2Q8TAC2 188 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 CEP76Q8TAP6 659 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 FRS2Q8WU20 508 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 PSMB7Q99436 277 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 MIR1-1HGQ9H1L0 117 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 PABPC3Q9H361 631 aaKnown RBP11.2□□□□□ -0.62
SF3A1-203ENST00000444440 EBF2Q9HAK2 575 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 IL21RQ9HBE5 538 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 SUN2Q9UH99 717 aa11.2□□□□□ -0.62
SF3A1-203ENST00000444440 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 A0A1W2PP55 124 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 LRRC10BA6NIK2 292 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 SEMA4FO95754 770 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 IGHV4-34P06331 123 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 UNGP13051 313 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 CDK11BP21127 795 aaKnown RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 MMP8P22894 467 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 GLDCP23378 1020 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 OXTRP30559 389 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 DPP6P42658 865 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 PLK1P53350 603 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 ST8SIA6P61647 398 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 DEUP1Q05D60 604 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 GFPT1Q06210 699 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 E2F5Q15329 346 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 CST6Q15828 149 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 C15orf59Q2T9L4 293 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 SLC25A52Q3SY17 297 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 ANO6Q4KMQ2 910 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 KCNT1Q5JUK3 1230 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 RABGAP1LQ5R372 815 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 SYCP2LQ5T4T6 812 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 TTC39BQ5VTQ0 682 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF776Q68DI1 518 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 PIP4P1Q86T03 277 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 FAM131BQ86XD5 332 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 KDM1BQ8NB78 822 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 FOXJ1Q92949 421 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 BIRC7Q96CA5 298 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 CAMK1GQ96NX5 476 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 ERGIC2Q96RQ1 377 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 C11orf70Q9BRQ4 267 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 WDCPQ9H6R7 721 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 FBRSQ9HAH7 460 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 MPP6Q9NZW5 540 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 ZNF212Q9UDV6 495 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 SLC12A6Q9UHW9 1150 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 WASF3Q9UPY6 502 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 TBC1D30Q9Y2I9 924 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.19□□□□□ -0.62
SF3A1-203ENST00000444440 FREM2Q5SZK8 3169 aa11.19□□□□□ -0.62
SF3A1-203ENST00000444440 IGLV3-10A0A075B6K4 115 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 A0A0D9SEW6 157 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 EDDM13A0A1B0GTR0 161 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 A0A1B0GTW7 788 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 DRGXA6NNA5 263 aa11.18□□□□□ -0.62
SF3A1-203ENST00000444440 BCAT2O15382 392 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms