RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 GMNCA6NCL1 334 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ZNF840PA6NDX5 716 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 FAM47DPA6NHR8 397 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 FAM159BA6NKW6 160 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 SLC38A8A6NNN8 435 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 E9PAM4 449 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 RNF103O00237 685 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GFRA2O00451 464 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CLDN5O00501 218 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ZNF197O14709 1029 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 BIRC5O15392 142 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TIMM44O43615 452 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CREB3O43889 395 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TYROBPO43914 113 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ACSL4O60488 711 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TLR5O60602 858 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MAFKO60675 156 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HNRNPCL1O60812 293 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GRAP2O75791 330 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GJB6O95452 261 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TGDSO95455 350 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 OAS1P00973 400 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PENKP01210 267 aaPredicted RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CALCAP01258 141 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 C1QAP02745 245 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 APOA4P06727 396 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 APRTP07741 180 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 SNRPAP09012 282 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HSPA8P11142 646 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ALADP13716 330 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CCNB1P14635 433 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HMGA1P17096 107 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PGAM1P18669 254 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HLA-DPA1P20036 260 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CA4P22748 312 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 AMPD1P23109 780 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ADRA1DP25100 572 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PTPN3P26045 913 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CDC25CP30307 473 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ELF1P32519 619 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 LSP1P33241 339 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 OR1D2P34982 312 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CRHR1P34998 444 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 BMPR1AP36894 532 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MSH2P43246 934 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CCT5P48643 541 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PLK1P53350 603 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CACNA2D1P54289 1103 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 EPHB3P54753 998 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PTPN5P54829 565 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MAGOHP61326 146 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 WDR5P61964 334 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 BASP1P80723 227 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CBX1P83916 185 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 IL9RQ01113 521 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GBE1Q04446 702 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ACVR1Q04771 509 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 DMTNQ08495 405 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 SLC10A2Q12908 348 aaPredicted RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TAF10Q12962 218 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PDIA2Q13087 525 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 DUSP4Q13115 394 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MMRN1Q13201 1228 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 NME3Q13232 169 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ORC1Q13415 861 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 SCN5AQ14524 2016 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 DMC1Q14565 340 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ITIH4Q14624 930 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TRADDQ15628 312 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CRY1Q16526 586 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CA9Q16790 459 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TRIM60Q495X7 471 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TTMPQ5BVD1 217 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MS4A13Q5J8X5 152 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PCID2Q5JVF3 399 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 RTP2Q5QGT7 225 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HECTD3Q5T447 861 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ARTNQ5T4W7 220 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ADGRF1Q5T601 910 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GRTP1Q5TC63 336 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MARC1Q5VT66 337 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 FYB2Q5VWT5 728 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PDPK2PQ6A1A2 396 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 RANBP10Q6VN20 620 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 KYAT3Q6YP21 454 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HFE2Q6ZVN8 426 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 HTR3DQ70Z44 454 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MARK2Q7KZI7 788 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GPRIN1Q7Z2K8 1008 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 PID1Q7Z2X4 250 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ADAT2Q7Z6V5 191 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TAC4Q86UU9 113 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 TRABD2AQ86V40 505 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 EXOC3L1Q86VI1 746 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 ZC3H18Q86VM9 953 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CAND1Q86VP6 1230 aaKnown RBP2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CHSY1Q86X52 802 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 CPNE8Q86YQ8 564 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 GPIHBP1Q8IV16 184 aa2.89□□□□□ -1.95
LINC00393-201ENST00000443621 MFN1Q8IWA4 741 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms