RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 FAM105AQ9NUU6 356 aa22.84■■□□□ 1.25
CTDSPL-206ENST00000443503 TBC1D4O60343 1298 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 PROCP04070 461 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 ELF3P78545 371 aaPredicted RBP22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 PRPF18Q99633 342 aaKnown RBP22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 ACTR8Q9H981 624 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 MYL4P12829 197 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 CCNB1P14635 433 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 DMC1Q14565 340 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 ATP6AP1LQ52LC2 224 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 WLSQ5T9L3 541 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 FAM35AQ86V20 835 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 TMEM161AQ9NX61 479 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 COQ4Q9Y3A0 265 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 ZNF23P17027 643 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 ATP6V1E1P36543 226 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 BRCC3P46736 316 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 NOMO1Q15155 1222 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 PCID2Q5JVF3 399 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 RAP1GAP2Q684P5 730 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 HERC6Q8IVU3 1022 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 OR9Q1Q8NGQ5 310 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 DUSP16Q9BY84 665 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 TRIM45Q9H8W5 580 aaPredicted RBP22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 MID1IP1Q9NPA3 183 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 IPPQ9Y573 584 aa22.83■■□□□ 1.25
CTDSPL-206ENST00000443503 SCAMP3O14828 347 aaKnown RBP22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 UNC5CO95185 931 aa22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 DDX5P17844 614 aaKnown RBP22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 KCNJ2P63252 427 aa22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 GBE1Q04446 702 aa22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 ANKS6Q68DC2 871 aa22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 P2RY11Q96G91 374 aa22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 CDK5RAP1Q96SZ6 601 aaKnown RBP22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 POLR1EQ9GZS1 481 aaKnown RBP22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 UBA2Q9UBT2 640 aaPredicted RBP22.83■■□□□ 1.24
CTDSPL-206ENST00000443503 TSHRP16473 764 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 TTC33Q6PID6 262 aaPredicted RBP22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 ACOX2Q99424 681 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 TEX12Q9BXU0 123 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 PRDM4Q9UKN5 801 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 FGF10O15520 208 aaPredicted RBP22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 GUCA1CO95843 209 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 CDKN2BP42772 138 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 SDHAF4Q5VUM1 108 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 ZFP42Q96MM3 310 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 HMX1Q9NP08 348 aaPredicted RBP22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 CCDC167Q9P0B6 97 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 SLIT2O94813 1529 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 TUFMP49411 452 aaKnown RBP22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 BTG3Q14201 252 aaPredicted RBP22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 QPCTQ16769 361 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 CPNE8Q86YQ8 564 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 SIAH1Q8IUQ4 282 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 SH3GL2Q99962 352 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 PDZD7Q9H5P4 517 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 PIF1Q9H611 641 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 CNGB3Q9NQW8 809 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 VTI1BQ9UEU0 232 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 SEPT3Q9UH03 358 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 EFR3BQ9Y2G0 817 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 PCDHA11Q9Y5I1 949 aa22.82■■□□□ 1.24
CTDSPL-206ENST00000443503 PRR23AA6NEV1 266 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 AGPSO00116 658 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 OTOAQ7RTW8 1153 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 GLT6D1Q7Z4J2 308 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 FAM50BQ9Y247 325 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 BTBD19C9JJ37 291 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 ZNF786Q8N393 782 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 FNIP1Q8TF40 1166 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 NKD2Q969F2 451 aaPredicted RBP22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 SCHIP1Q9P0W5 487 aaPredicted RBP22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 PDP2Q9P2J9 529 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 GGA2Q9UJY4 613 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 MMP3P08254 477 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 PRKAA2P54646 552 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 LZTS3O60299 673 aaPredicted RBP22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 SOAT1P35610 550 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 ZNF280AP59817 542 aaPredicted RBP22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 CHRNB3Q05901 458 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 ZNF284Q2VY69 593 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 LRRC15Q8TF66 581 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 ANKRD6Q9Y2G4 727 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 PTCH2Q9Y6C5 1203 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 ABCC6O95255 1503 aa22.81■■□□□ 1.24
CTDSPL-206ENST00000443503 CD86P42081 329 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC34A1Q06495 639 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 IYDQ6PHW0 289 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 PPP1R10Q96QC0 940 aaKnown RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 RAD54BQ9Y620 910 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 HSPA13P48723 471 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 PMF1Q6P1K2 205 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 POMKQ9H5K3 350 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 SLC25A13Q9UJS0 675 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 DUOX1Q9NRD9 1551 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 SMIM35A0A1B0GVV1 85 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 KATNA1O75449 491 aa22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 CYP1A1P04798 512 aaPredicted RBP22.8■■□□□ 1.24
CTDSPL-206ENST00000443503 ITGA2BP08514 1039 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms