RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 KRT3P12035 628 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 MAPK8P45983 427 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 CDH4P55283 916 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 IRX4P78413 519 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 SULT2A1Q06520 285 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 PTP4A2Q12974 167 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 ASIC2Q16515 512 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 ALFQ53S48 1182 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 DNAJC24Q6P3W2 148 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 LRSAM1Q6UWE0 723 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 ARCQ7LC44 396 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 PHF13Q86YI8 300 aaPredicted RBP21.67■■□□□ 1.06
CDKN3-204ENST00000442975 KDM1BQ8NB78 822 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 OR52K2Q8NGK3 314 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 GANCQ8TET4 914 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 BAP1Q92560 729 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 NAP1L5Q96NT1 182 aaPredicted RBP21.67■■□□□ 1.06
CDKN3-204ENST00000442975 NUP58Q9BVL2 599 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 FSCN3Q9NQT6 498 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 TMEM51Q9NW97 253 aa21.67■■□□□ 1.06
CDKN3-204ENST00000442975 C2CD4BA6NLJ0 364 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 E9PAM4 449 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 RNASEH1O60930 286 aaKnown RBP21.66■■□□□ 1.06
CDKN3-204ENST00000442975 SRGAP2O75044 1071 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 IGLV3-19P01714 112 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 NNMTP40261 264 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 FOXK2Q01167 660 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 ZBTB16Q05516 673 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 CCDC14Q49A88 953 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 RAB6CQ53S08 254 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 WDR45BQ5MNZ6 344 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 PEAR1Q5VY43 1037 aaPredicted RBP21.66■■□□□ 1.06
CDKN3-204ENST00000442975 MON1BQ7L1V2 547 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 SNX19Q92543 992 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 ZNF419Q96HQ0 510 aaPredicted RBP21.66■■□□□ 1.06
CDKN3-204ENST00000442975 PPP1R9BQ96SB3 815 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 RAB6CQ9H0N0 254 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 MIR1-1HGQ9H1L0 117 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 RSPH9Q9H1X1 276 aaPredicted RBP21.66■■□□□ 1.06
CDKN3-204ENST00000442975 TMEM9BQ9NQ34 198 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 MPP6Q9NZW5 540 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 SLC25A13Q9UJS0 675 aa21.66■■□□□ 1.06
CDKN3-204ENST00000442975 ITIH6Q6UXX5 1313 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 A0A1W2PQC6 194 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 MED19A0JLT2 244 aaPredicted RBP21.65■■□□□ 1.06
CDKN3-204ENST00000442975 C4orf47A7E2U8 309 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 GOLGA6L19H0YKK7 550 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 MAOBP27338 520 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 PSMD8P48556 350 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 C1QBPQ07021 282 aaKnown RBP21.65■■□□□ 1.06
CDKN3-204ENST00000442975 DUOXA1Q1HG43 343 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 ZSCAN23Q3MJ62 389 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 C9orf64Q5T6V5 341 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 SH3PXD2AQ5TCZ1 1133 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 BNIPLQ7Z465 357 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 RABEPKQ7Z6M1 372 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 C3orf20Q8ND61 904 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 CEP76Q8TAP6 659 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 FAM172AQ8WUF8 416 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 MCEEQ96PE7 176 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 HAPLN3Q96S86 360 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 FEM1AQ9BSK4 669 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 GTPBP2Q9BX10 602 aaKnown RBP21.65■■□□□ 1.06
CDKN3-204ENST00000442975 MYO6Q9UM54 1294 aa21.65■■□□□ 1.06
CDKN3-204ENST00000442975 ANKRD62A6NC57 917 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 TMCO5BA8MYB1 307 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 VAV1P15498 845 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 ENGP17813 658 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 TNFAIP3P21580 790 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 GPD1P21695 349 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 RFC1P35251 1148 aaPredicted RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 ATXN3P54252 364 aaPredicted RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 GSCP56915 257 aaPredicted RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 CST6Q15828 149 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 UAP1L1Q3KQV9 507 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 ARL13BQ3SXY8 428 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 C5orf22Q49AR2 442 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 PPM1JQ5JR12 505 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 ACBD5Q5T8D3 534 aaPredicted RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 DCAF12L1Q5VU92 463 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 MMAAQ8IVH4 418 aaKnown RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 ZNF683Q8IZ20 524 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 ZCCHC9Q8N567 271 aaKnown RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 C1orf74Q96LT6 269 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 PABPC3Q9H361 631 aaKnown RBP21.64■■□□□ 1.05
CDKN3-204ENST00000442975 SUSD2Q9UGT4 822 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 TBC1D30Q9Y2I9 924 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 THADAQ6YHU6 1953 aa21.64■■□□□ 1.05
CDKN3-204ENST00000442975 TARSL2A2RTX5 802 aaKnown RBP21.63■■□□□ 1.05
CDKN3-204ENST00000442975 MID1O15344 667 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 GNSP15586 552 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 ACSL1P33121 698 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 PTPN9P43378 593 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 PLK1P53350 603 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 FANCCQ00597 558 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 GFPT1Q06210 699 aaPredicted RBP21.63■■□□□ 1.05
CDKN3-204ENST00000442975 ARID5BQ14865 1188 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 ACCSLQ4AC99 568 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 C6orf118Q5T5N4 469 aa21.63■■□□□ 1.05
CDKN3-204ENST00000442975 SFMBT2Q5VUG0 894 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms