RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 BOLA3Q53S33 107 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 PPP6R3Q5H9R7 873 aaPredicted RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 MAMSTRQ6ZN01 415 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 KIAA1328Q86T90 577 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 C1orf210Q8IVY1 113 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 CCDC112Q8NEF3 446 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 TTC17Q96AE7 1141 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 PSMB7Q99436 277 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 FEM1AQ9BSK4 669 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 NOL6Q9H6R4 1146 aaKnown RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 LUC7LQ9NQ29 371 aaKnown RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 PRMT8Q9NR22 394 aaPredicted RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.47■□□□□ 0.23
USP39-205ENST00000442708 TMEM248Q9NWD8 314 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 CACNA2D2Q9NY47 1150 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 CWC15Q9P013 229 aaKnown RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 THAP10Q9P2Z0 257 aaPredicted RBP16.47■□□□□ 0.23
USP39-205ENST00000442708 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
USP39-205ENST00000442708 NUP205Q92621 2012 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 ARHGAP6O43182 974 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 GALR2O43603 387 aaPredicted RBP16.46■□□□□ 0.23
USP39-205ENST00000442708 RHOCP08134 193 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 CD48P09326 243 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 TDGF1P13385 188 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 COMTP21964 271 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 ZNF234Q14588 700 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 EIF4HQ15056 248 aaKnown RBP16.46■□□□□ 0.23
USP39-205ENST00000442708 TSSK4Q6SA08 328 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 TMEM92Q6UXU6 159 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 NUDT18Q6ZVK8 323 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 SETD3Q86TU7 594 aaPredicted RBP16.46■□□□□ 0.23
USP39-205ENST00000442708 ALYREFQ86V81 257 aaKnown RBP16.46■□□□□ 0.23
USP39-205ENST00000442708 CCDC117Q8IWD4 279 aaPredicted RBP16.46■□□□□ 0.23
USP39-205ENST00000442708 ZNF557Q8N988 423 aaPredicted RBP16.46■□□□□ 0.23
USP39-205ENST00000442708 PRSS33Q8NF86 280 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 OR7D4Q8NG98 312 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 TPCN2Q8NHX9 752 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 KCNV2Q8TDN2 545 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 ERLEC1Q96DZ1 483 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 MYO19Q96H55 970 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 MRGPRX3Q96LB0 322 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 EPAS1Q99814 870 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 IER2Q9BTL4 223 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 PCDH18Q9HCL0 1135 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 KLHL11Q9NVR0 708 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 DNAI1Q9UI46 699 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 LCMT1Q9UIC8 334 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 MMP17Q9ULZ9 603 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 CKAP5Q14008 2032 aa16.46■□□□□ 0.23
USP39-205ENST00000442708 WASH4PA8MWX3 477 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 K7ESF4 209 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 EEF2KO00418 725 aaKnown RBP16.45■□□□□ 0.22
USP39-205ENST00000442708 TIMM44O43615 452 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 POLR2EP19388 210 aaKnown RBP16.45■□□□□ 0.22
USP39-205ENST00000442708 GLDCP23378 1020 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 IL4RP24394 825 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 PRKCHP24723 683 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 ACVRL1P37023 503 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 IL12RB1P42701 662 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 CXCL12P48061 93 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 TPI1P60174 286 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 MMRN1Q13201 1228 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 SLC12A1Q13621 1099 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 ENPP2Q13822 863 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 DPYSQ14117 519 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 DMC1Q14565 340 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 ANGPT1Q15389 498 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 HADHQ16836 314 aaKnown RBP16.45■□□□□ 0.22
USP39-205ENST00000442708 RFX8Q6ZV50 586 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 SYT13Q7L8C5 426 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 POLNQ7Z5Q5 900 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 RTL3Q8N8U3 475 aaKnown RBP16.45■□□□□ 0.22
USP39-205ENST00000442708 FAM71BQ8TC56 605 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 TSC1Q92574 1164 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 ZNF830Q96NB3 372 aaPredicted RBP16.45■□□□□ 0.22
USP39-205ENST00000442708 KLC2Q9H0B6 622 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 KCNF1Q9H3M0 494 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 CD248Q9HCU0 757 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 MFHAS1Q9Y4C4 1052 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 ALG6Q9Y672 507 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 STON1Q9Y6Q2 735 aa16.45■□□□□ 0.22
USP39-205ENST00000442708 NYNRINQ9P2P1 1898 aaKnown RBP16.45■□□□□ 0.22
USP39-205ENST00000442708 EML5Q05BV3 1969 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 A0A1W2PQF6 199 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 ILVBLA1L0T0 632 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 LAMTOR5O43504 91 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 SNAP91O60641 907 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 ATG13O75143 517 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 DLDP09622 509 aaKnown RBP16.44■□□□□ 0.22
USP39-205ENST00000442708 NTSR1P30989 418 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 MAPKAPK2P49137 400 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 STK19P49842 368 aaPredicted RBP16.44■□□□□ 0.22
USP39-205ENST00000442708 CCR3P51677 355 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 GNA12Q03113 381 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 DMWDQ09019 674 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 C6orf118Q5T5N4 469 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 C11orf63Q6NUN7 778 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 KIAA1211LQ6NV74 962 aa16.44■□□□□ 0.22
USP39-205ENST00000442708 CHPFQ8IZ52 775 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms