RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SEMA3BQ13214 749 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 ZNF234Q14588 700 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 HADHQ16836 314 aaKnown RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 PLEKHG6Q3KR16 790 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 FNDC3BQ53EP0 1204 aaKnown RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 KCNT1Q5JUK3 1230 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 C6orf118Q5T5N4 469 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 CYP4V2Q6ZWL3 525 aaPredicted RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 SETD3Q86TU7 594 aaPredicted RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 OR52K2Q8NGK3 314 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 HSPH1Q92598 858 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 KCTD15Q96SI1 283 aaPredicted RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 MUC3BQ9H195 1237 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 ZNF212Q9UDV6 495 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 RAPGEFL1Q9UHV5 662 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 NEU3Q9UQ49 428 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 REXO2Q9Y3B8 237 aaKnown RBP12.67□□□□□ -0.38
USP1-203ENST00000442679 OR51B4Q9Y5P0 310 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 STON1Q9Y6Q2 735 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 KIAA1549LQ6ZVL6 1849 aa12.67□□□□□ -0.38
USP1-203ENST00000442679 ILVBLA1L0T0 632 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 EEF2KO00418 725 aaKnown RBP12.66□□□□□ -0.38
USP1-203ENST00000442679 DAPK3O43293 454 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 RARAP10276 462 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 TDGF1P13385 188 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 HOXB2P14652 356 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 HOXC13P31276 330 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 MAN1A1P33908 653 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 HTR7P34969 479 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 IL12RB1P42701 662 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 CTSOP43234 321 aaPredicted RBP12.66□□□□□ -0.38
USP1-203ENST00000442679 NUMBP49757 651 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 NRLP54845 237 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 TPI1P60174 286 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 KRT83P78385 493 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 ECT2LQ008S8 904 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 SLC25A11Q02978 314 aaKnown RBP12.66□□□□□ -0.38
USP1-203ENST00000442679 CRY1Q16526 586 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 PTPRNQ16849 979 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 ZNF528Q3MIS6 628 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 PPP6R3Q5H9R7 873 aaPredicted RBP12.66□□□□□ -0.38
USP1-203ENST00000442679 TXNRD3NBQ6F5E7 133 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 NLRP14Q86W24 1093 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 CPNE8Q86YQ8 564 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 ACRBPQ8NEB7 543 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 TSTD1Q8NFU3 115 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 TEKT4Q8WW24 435 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 ALG14Q96F25 216 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 HHIPQ96QV1 700 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 GABRG3Q99928 467 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 IRF2BPLQ9H1B7 796 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 CATSPERBQ9H7T0 1116 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 POLMQ9NP87 494 aaPredicted RBP12.66□□□□□ -0.38
USP1-203ENST00000442679 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.66□□□□□ -0.38
USP1-203ENST00000442679 TMEM248Q9NWD8 314 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 DNAI1Q9UI46 699 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 VPS28Q9UK41 221 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 ERVW-1Q9UQF0 538 aa12.66□□□□□ -0.38
USP1-203ENST00000442679 WDFY4Q6ZS81 3184 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 A0A0A6YYK5 440 aaPredicted RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 A0A0D9SEW6 157 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 A0A1W2PQF6 199 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 RCCD1A6NED2 376 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 FGF10O15520 208 aaPredicted RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 APBB3O95704 486 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 SRPRAP08240 638 aaKnown RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 GOT1P17174 413 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 HOXA6P31267 233 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 PXNP49023 591 aaPredicted RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 MAPKAPK2P49137 400 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 ZNF135P52742 658 aaPredicted RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 HADHBP55084 474 aaKnown RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 ST8SIA6P61647 398 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 SULT2A1Q06520 285 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 DMWDQ09019 674 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 ENPP2Q13822 863 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 SERPINA13PQ6UXR4 307 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 ZNF783Q6ZMS7 281 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 KIAA1328Q86T90 577 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 OR7D4Q8NG98 312 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 ANP32BQ92688 251 aaKnown RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 ATOH1Q92858 354 aaPredicted RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 ERLEC1Q96DZ1 483 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 MRGPRX3Q96LB0 322 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 DESI2Q9BSY9 194 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 SPON2Q9BUD6 331 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 FAM126AQ9BYI3 521 aaPredicted RBP12.65□□□□□ -0.38
USP1-203ENST00000442679 NDFIP2Q9NV92 336 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 RAD54BQ9Y620 910 aa12.65□□□□□ -0.38
USP1-203ENST00000442679 DMDP11532 3685 aa12.64□□□□□ -0.39
USP1-203ENST00000442679 TCRBV21S2A2A0A5A6 115 aa12.64□□□□□ -0.39
USP1-203ENST00000442679 WASH4PA8MWX3 477 aa12.64□□□□□ -0.39
USP1-203ENST00000442679 SYNCRIPO60506 623 aaKnown RBP12.64□□□□□ -0.39
USP1-203ENST00000442679 ALDH1A2O94788 518 aa12.64□□□□□ -0.39
USP1-203ENST00000442679 EPHX1P07099 455 aa12.64□□□□□ -0.39
USP1-203ENST00000442679 HLA-EP13747 358 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms