RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 GALCP54803 685 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 RACK1P63244 317 aaKnown RBP12.14□□□□□ -0.47
TTC28-203ENST00000442232 BNC1Q01954 994 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 ZNF177Q13360 481 aaPredicted RBP12.14□□□□□ -0.47
TTC28-203ENST00000442232 TAF5Q15542 800 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 C9orf64Q5T6V5 341 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 NCEH1Q6PIU2 408 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 FAM183BPQ6ZVS7 135 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 GLRX5Q86SX6 157 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 CIR1Q86X95 450 aaPredicted RBP12.14□□□□□ -0.47
TTC28-203ENST00000442232 ZDHHC17Q8IUH5 632 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 APCDD1Q8J025 514 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 PNPLA1Q8N8W4 532 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 MSANTD4Q8NCY6 345 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 OR14C36Q8NHC7 312 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 OR8D1Q8WZ84 308 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 SPAG5Q96R06 1193 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 TMEM121BQ9BXQ6 578 aaPredicted RBP12.14□□□□□ -0.47
TTC28-203ENST00000442232 NEUROG2Q9H2A3 272 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 CHMP5Q9NZZ3 219 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 ADAMTS1Q9UHI8 967 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 DNAJC12Q9UKB3 198 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 STAP1Q9ULZ2 295 aa12.14□□□□□ -0.47
TTC28-203ENST00000442232 CABIN1Q9Y6J0 2220 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 KNL1Q8NG31 2342 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 A0A1W2PPC4 97 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 GOLGA8CPA6NN73 597 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 C1QTNF3-AMACRE9PGA6 284 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 CBFA2T3O75081 653 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 ZNF18P17022 549 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 GOT1P17174 413 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 MZF1P28698 734 aaPredicted RBP12.13□□□□□ -0.47
TTC28-203ENST00000442232 NOS2P35228 1153 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 CCR5P51681 352 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 PITX1P78337 314 aaPredicted RBP12.13□□□□□ -0.47
TTC28-203ENST00000442232 SLC6A3Q01959 620 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 APBA1Q02410 837 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 RAPGEF1Q13905 1077 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 ACCSLQ4AC99 568 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 FAM46CQ5VWP2 391 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 FBXL22Q6P050 247 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 LAYNQ6UX15 382 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 SLC26A9Q7LBE3 791 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 STK40Q8N2I9 435 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 TMEM35BQ8NCS4 154 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 CCDC114Q96M63 670 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 SLC6A18Q96N87 628 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 MUC3BQ9H195 1237 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 NDST4Q9H3R1 872 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 CLSTN2Q9H4D0 955 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 TMEM51Q9NW97 253 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 SLCO3A1Q9UIG8 710 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 VPS28Q9UK41 221 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 VANGL2Q9ULK5 521 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 FARP1Q9Y4F1 1045 aaPredicted RBP12.13□□□□□ -0.47
TTC28-203ENST00000442232 SLCO1B1Q9Y6L6 691 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 FAM208BQ5VWN6 2430 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 CHD6Q8TD26 2715 aa12.13□□□□□ -0.47
TTC28-203ENST00000442232 PTPRBP23467 1997 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3DA0A087WVF3 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3IA0A087WXS9 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3EA0A087X179 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3KA0A087X1G2 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 FAM221BA6H8Z2 402 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3FA6NER0 549 aaPredicted RBP12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3LB9A6J9 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 M0QYT0 321 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 VILLO15195 856 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 YKT6O15498 198 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 CLDN11O75508 207 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 ERBB2P04626 1255 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 IGHV4-34P06331 123 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3HP0C7X1 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 CTSKP43235 329 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 NUMBP49757 651 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 SULT1E1P49888 294 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 ADPRHP54922 357 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 CENPCQ03188 943 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 PTPN20Q4JDL3 420 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 VWA3BQ502W6 1294 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 BRMS1LQ5PSV4 323 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3GQ6DHY5 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3CQ6IPX1 549 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 OLFML1Q6UWY5 402 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 LRRC31Q6UY01 552 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 TBC1D3Q8IZP1 549 aaPredicted RBP12.12□□□□□ -0.47
TTC28-203ENST00000442232 SERAC1Q96JX3 654 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 PRMT1Q99873 361 aaKnown RBP12.12□□□□□ -0.47
TTC28-203ENST00000442232 TUBGCP2Q9BSJ2 902 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 SIK2Q9H0K1 926 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 GDF3Q9NR23 364 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.12□□□□□ -0.47
TTC28-203ENST00000442232 FTSJ1Q9UET6 329 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 SERGEFQ9UGK8 458 aa12.12□□□□□ -0.47
TTC28-203ENST00000442232 SRRM3A6NNA2 597 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 H0Y8X5 98 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 FOXN3O00409 490 aaPredicted RBP12.11□□□□□ -0.47
TTC28-203ENST00000442232 ALOX15BO15296 676 aa12.11□□□□□ -0.47
TTC28-203ENST00000442232 SLC7A4O43246 635 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms