RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 RGPD4Q7Z3J3 1758 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 TMX2-CTNND1H3BSU7 103 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 M0QYV0 167 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 H6PDO95479 791 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 ERVK-10P10266 1014 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 GBE1Q04446 702 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 ABHD15Q6UXT9 468 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 CDKL2Q92772 493 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 TMEM79Q9BSE2 394 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 PLGRKTQ9HBL7 147 aa20.73■□□□□ 0.91
SHOX2-203ENST00000441443 MPSTP25325 297 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 ABCD1P33897 745 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 LSM12Q3MHD2 195 aaKnown RBP20.72■□□□□ 0.91
SHOX2-203ENST00000441443 TREML2Q5T2D2 321 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 KRT80Q6KB66 452 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 CATSPERGQ6ZRH7 1159 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 ANKRD23Q86SG2 305 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 HACE1Q8IYU2 909 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MCRS1Q96EZ8 462 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MAGEB5Q9BZ81 275 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 OSBPL6Q9BZF3 934 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 CLEC11AQ9Y240 323 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MYO18AQ92614 2054 aaKnown RBP20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MED7O43513 233 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MICAL2O94851 1124 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 PIGRP01833 764 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 ALDH3B2P48448 385 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 STXBP2Q15833 593 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 XKR3Q5GH77 459 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 RDM1Q8NG50 284 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 KLRG1Q96E93 195 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 CNPY3Q9BT09 278 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 NUF2Q9BZD4 464 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 XYLT2Q9H1B5 865 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 TXNDC16Q9P2K2 825 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 FER1L6Q2WGJ9 1857 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 ARID2Q68CP9 1835 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 PLOD2O00469 737 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 SUPT20HL2P0C7V6 817 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MGAT1P26572 445 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 ART3Q13508 389 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 SUPT20HL1Q3ZLR7 823 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 NXNQ6DKJ4 435 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 OR6B2Q6IFH4 312 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 CLVS1Q8IUQ0 354 aaPredicted RBP20.72■□□□□ 0.91
SHOX2-203ENST00000441443 RANBP9Q96S59 729 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 NPAS2Q99743 824 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 PORCNQ9H237 461 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 TUBGCP4Q9UGJ1 667 aa20.72■□□□□ 0.91
SHOX2-203ENST00000441443 MLH1P40692 756 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 NAMPTP43490 491 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 GTF2A2P52657 109 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 PDAP1Q13442 181 aaKnown RBP20.71■□□□□ 0.91
SHOX2-203ENST00000441443 SLC9A4Q6AI14 798 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 NETO2Q8NC67 525 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 LRTOMTQ8WZ04 291 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 SNX15Q9NRS6 342 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 TBCCD1Q9NVR7 557 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 MTMR10Q9NXD2 777 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-203ENST00000441443 BCAS2O75934 225 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-203ENST00000441443 LTFP02788 710 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 TGM2P21980 687 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 DLG2Q15700 870 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 METTL21CQ5VZV1 264 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 GADL1Q6ZQY3 521 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 CDR2LQ86X02 465 aaPredicted RBP20.71■□□□□ 0.91
SHOX2-203ENST00000441443 CROCCP3Q8IVE0 287 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 R3HDMLQ9H3Y0 253 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 OLAHQ9NV23 265 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 HOXC10Q9NYD6 342 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 BCAP29Q9UHQ4 241 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 MYRFQ9Y2G1 1151 aa20.71■□□□□ 0.91
SHOX2-203ENST00000441443 MAFGO15525 162 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 ALDH1A2O94788 518 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 IRF9Q00978 393 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 TRIM50Q86XT4 487 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 RP9Q8TA86 221 aaKnown RBP20.7■□□□□ 0.9
SHOX2-203ENST00000441443 CDHR1Q96JP9 859 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 SLC29A1Q99808 456 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 PCDHAC1Q9H158 963 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 DHX35Q9H5Z1 703 aaKnown RBP20.7■□□□□ 0.9
SHOX2-203ENST00000441443 C20orf96Q9NUD7 363 aaPredicted RBP20.7■□□□□ 0.9
SHOX2-203ENST00000441443 HES2Q9Y543 173 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 C2CD4BA6NLJ0 364 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 H3BNH8 94 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 ACOT8O14734 319 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 TPSB2P20231 275 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 SLC5A3P53794 718 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 TPSAB1Q15661 275 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 ILDR2Q71H61 639 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 PGAM4Q8N0Y7 254 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 BIRC8Q96P09 236 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 TRPV6Q9H1D0 765 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 CAB39LQ9H9S4 337 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 ADA2Q9NZK5 511 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 SPATA31C2B4DYI2 1134 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 CLCN2P51788 898 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 PRAMEP78395 509 aa20.7■□□□□ 0.9
SHOX2-203ENST00000441443 IKBKEQ14164 716 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms