RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 RBPJLQ9UBG7 517 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 ZC3H7BQ9UGR2 993 aaKnown RBP17.17■□□□□ 0.34
PMS1-213ENST00000441310 CORINQ9Y5Q5 1042 aa17.17■□□□□ 0.34
PMS1-213ENST00000441310 EXTL3O43909 919 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 FAM189A1O60320 539 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 FGF3P11487 239 aaPredicted RBP17.16■□□□□ 0.34
PMS1-213ENST00000441310 YBX3P16989 372 aaKnown RBP eCLIP17.16■□□□□ 0.34
PMS1-213ENST00000441310 GARTP22102 1010 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 S100A1P23297 94 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 SNRPFP62306 86 aaKnown RBP17.16■□□□□ 0.34
PMS1-213ENST00000441310 GNA12Q03113 381 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 DPYSL3Q14195 570 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 RGS21Q2M5E4 152 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 FAXCQ5TGI0 409 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 SNX32Q86XE0 403 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 TMEM130Q8N3G9 435 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 FIBCD1Q8N539 461 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 GBA3Q9H227 469 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 PNPLA3Q9NST1 481 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 GID8Q9NWU2 228 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 COQ4Q9Y3A0 265 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 KRT38O76015 456 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 OGDHQ02218 1023 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 USP37Q86T82 979 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 ERO1BQ86YB8 467 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 UBR7Q8N806 425 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 TMEM102Q8N9M5 508 aaPredicted RBP17.16■□□□□ 0.34
PMS1-213ENST00000441310 FAM47BQ8NA70 645 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 PDCD6IPQ8WUM4 868 aaKnown RBP17.16■□□□□ 0.34
PMS1-213ENST00000441310 SEPT1Q8WYJ6 367 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 ATP6V1E2Q96A05 226 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 FERMT1Q9BQL6 677 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 SPON1Q9HCB6 807 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 NRBP2Q9NSY0 501 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 PARVAQ9NVD7 372 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 MCM3APO60318 1980 aa17.16■□□□□ 0.34
PMS1-213ENST00000441310 CNMDO75829 334 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ATG7O95352 703 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 PABPC1P11940 636 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 TSHRP16473 764 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ICAM3P32942 547 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 CEACAM7Q14002 265 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 WDR44Q5JSH3 913 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 AARS2Q5JTZ9 985 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 IL23RQ5VWK5 629 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 RAVER1Q8IY67 606 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 DSELQ8IZU8 1212 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ZNF786Q8N393 782 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 CLK4Q9HAZ1 481 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 NOX1Q9Y5S8 564 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 GOLGA8QA0A0J9YX86 632 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 PRSS51A0A1B0GVH4 220 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 GOLGA8OA6NCC3 632 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 GOLGA8NF8WBI6 632 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 SEC24DO94855 1032 aaPredicted RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 CYP2C9P11712 490 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ARRB2P32121 409 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 CRHR1P34998 444 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 TXNL4AP83876 142 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 SMAD1Q15797 465 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 CLPPQ16740 277 aaPredicted RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 TRIM16LQ309B1 348 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ZBED5Q49AG3 693 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ZNF394Q53GI3 561 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 N4BP2L1Q5TBK1 243 aaPredicted RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 NEPROQ6NW34 567 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 RNF149Q8NC42 400 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 SLC4A5Q9BY07 1137 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 NAA50Q9GZZ1 169 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 TRPV6Q9H1D0 765 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 RPF2Q9H7B2 306 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 E2F8A0AVK6 867 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 ARL2P36404 184 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 TMEM132AQ24JP5 1023 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 TMEM270Q6UE05 265 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 CARM1Q86X55 608 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ANKRD13AQ8IZ07 590 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 SLC15A4Q8N697 577 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 ADAM32Q8TC27 787 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 TRPC4APQ8TEL6 797 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 TAMM41Q96BW9 452 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 FAF2Q96CS3 445 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 RNPEPQ9H4A4 650 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 STN1Q9H668 368 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 CXorf21Q9HAI6 301 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
PMS1-213ENST00000441310 NCKIPSDQ9NZQ3 722 aa17.15■□□□□ 0.34
PMS1-213ENST00000441310 A0A0G2JLL6 359 aaPredicted RBP17.14■□□□□ 0.33
PMS1-213ENST00000441310 H3BMQ9 156 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 VNN1O95497 513 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 KCTD2Q14681 263 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 INAQ16352 499 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 SMUG1Q53HV7 270 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 FSCBQ5H9T9 825 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 TRMT10BQ6PF06 316 aaKnown RBP17.14■□□□□ 0.33
PMS1-213ENST00000441310 TMEM26Q6ZUK4 368 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 LYSMD3Q7Z3D4 306 aa17.14■□□□□ 0.33
PMS1-213ENST00000441310 PRRT2Q7Z6L0 340 aaPredicted RBP17.14■□□□□ 0.33
PMS1-213ENST00000441310 TMEM126BQ8IUX1 230 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms