RNA–Protein interactions for RNA: ENST00000441123.1

BRPF3-203, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 1 (best)

Gene BRPF3, Length 5,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-203ENST00000441123 ITIH5Q86UX2 942 aa13.13□□□□□ -0.31
BRPF3-203ENST00000441123 EDEM1Q92611 657 aa13.13□□□□□ -0.31
BRPF3-203ENST00000441123 MRPS31Q92665 395 aaKnown RBP13.13□□□□□ -0.31
BRPF3-203ENST00000441123 NKD2Q969F2 451 aaPredicted RBP13.13□□□□□ -0.31
BRPF3-203ENST00000441123 TBC1D10AQ9BXI6 508 aa13.13□□□□□ -0.31
BRPF3-203ENST00000441123 UGT2B28Q9BY64 529 aa13.13□□□□□ -0.31
BRPF3-203ENST00000441123 FGFBP2Q9BYJ0 223 aa13.13□□□□□ -0.31
BRPF3-203ENST00000441123 UBP1Q9NZI7 540 aa13.13□□□□□ -0.31
BRPF3-203ENST00000441123 CASTOR2A6NHX0 329 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 LTA4HP09960 611 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 PSMB4P28070 264 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 CCDC92Q53HC0 331 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 FAM45BPQ6NSW5 357 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 USP50Q70EL3 339 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TDRPQ86YL5 185 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 FAM45AQ8TCE6 357 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 STARD8Q92502 1023 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 NIFKQ9BYG3 293 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ERVK-5Q9HDB9 667 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 IGLV3-22A0A075B6J6 115 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 C4BPAP04003 597 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ZNF7P17097 686 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 POLD2P49005 469 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 DAB2P98082 770 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 BTKQ06187 659 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TOP6BLQ8N6T0 577 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 RP9Q8TA86 221 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TLCD1Q96CP7 247 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ULBP1Q9BZM6 244 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 DMAC2Q9NW81 257 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ARMCX1Q9P291 453 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 MYRFQ9Y2G1 1151 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ABLIM1O14639 778 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 WDR47O94967 919 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TPH1P17752 444 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ACAT1P24752 427 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 YWHAQP27348 245 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 NOMO1Q15155 1222 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 APTXQ7Z2E3 356 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 HS6ST3Q8IZP7 471 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 CARNMT1Q8N4J0 409 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 SEMA4DQ92854 862 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TGDSO95455 350 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 SERPINB1P30740 379 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 PRIM2P49643 509 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TMEM132BQ14DG7 1078 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 DRICH1Q6PGQ1 229 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 OTOAQ7RTW8 1153 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TMEM169Q96HH4 297 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 PLEKHA8Q96JA3 519 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 NSMCE2Q96MF7 247 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 DHX33Q9H6R0 707 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 KRCC1Q9NPI7 259 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ITM2BQ9Y287 266 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TNPO3Q9Y5L0 923 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 CCDC154A6NI56 674 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 NCF1BA6NI72 391 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 NCF1CA8MVU1 366 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 H3BMM5 538 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 DCXO43602 365 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ZNF862O60290 1169 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ARIH2O95376 493 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 NCF1P14598 390 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 ATP5F1P24539 256 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 MZF1P28698 734 aaPredicted RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 TNFSF9P41273 254 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 EPHB3P54753 998 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 INSCQ1MX18 579 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 AADATQ8N5Z0 425 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 POLR1EQ9GZS1 481 aaKnown RBP13.12□□□□□ -0.31
BRPF3-203ENST00000441123 MID1IP1Q9NPA3 183 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 VPS28Q9UK41 221 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 RAP2CQ9Y3L5 183 aa13.12□□□□□ -0.31
BRPF3-203ENST00000441123 CHD2O14647 1828 aaKnown RBP13.11□□□□□ -0.31
BRPF3-203ENST00000441123 MANSC4A6NHS7 340 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-203ENST00000441123 M0R2N6 131 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 PIGNO95427 931 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 SOAT1P35610 550 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 FBXW4P57775 412 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 EPS8Q12929 822 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 TP53BP2Q13625 1128 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 VGLL4Q14135 290 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 TCHHL1Q5QJ38 904 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-203ENST00000441123 RETSATQ6NUM9 610 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 TSHZ1Q6ZSZ6 1077 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 SENP8Q96LD8 212 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 ARHGAP28Q9P2N2 729 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 FETUBQ9UGM5 382 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 ENOPH1Q9UHY7 261 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 COG5Q9UP83 839 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 USP20Q9Y2K6 914 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 ARFGEF2Q9Y6D5 1785 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 TRAFD1O14545 582 aaPredicted RBP13.11□□□□□ -0.31
BRPF3-203ENST00000441123 TPST1O60507 370 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 CSDE1O75534 798 aaKnown RBP13.11□□□□□ -0.31
BRPF3-203ENST00000441123 RRM2P31350 389 aa13.11□□□□□ -0.31
BRPF3-203ENST00000441123 KRT20P35900 424 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms