RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 LRRC31Q6UY01 552 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 TFAP2DQ7Z6R9 452 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 SLC41A1Q8IVJ1 513 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 ZNF683Q8IZ20 524 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 C3orf20Q8ND61 904 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 NETO1Q8TDF5 533 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 SYT11Q9BT88 431 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 GPR174Q9BXC1 333 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 HAUS4Q9H6D7 363 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 WSB2Q9NYS7 404 aaPredicted RBP14.14□□□□□ -0.15
LTBR-202ENST00000440421 TAS2R14Q9NYV8 317 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 MPP6Q9NZW5 540 aa14.14□□□□□ -0.15
LTBR-202ENST00000440421 SIGLEC16A6NMB1 481 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 KHNYNO15037 678 aaKnown RBP14.13□□□□□ -0.15
LTBR-202ENST00000440421 RHOCP08134 193 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 SKILP12757 684 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 SDHBP21912 280 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 RRM1P23921 792 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 NNMTP40261 264 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 PTPN9P43378 593 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 PLK1P53350 603 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 GSCP56915 257 aaPredicted RBP14.13□□□□□ -0.15
LTBR-202ENST00000440421 ZNF776Q68DI1 518 aaPredicted RBP14.13□□□□□ -0.15
LTBR-202ENST00000440421 WDR59Q6PJI9 974 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 DGLUCYQ7Z3D6 616 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 DNAAF5Q86Y56 855 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 SYT12Q8IV01 421 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 MCOLN2Q8IZK6 566 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 FAM172AQ8WUF8 416 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 ALG14Q96F25 216 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 C1orf74Q96LT6 269 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 MCEEQ96PE7 176 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 HAPLN3Q96S86 360 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 FEM1AQ9BSK4 669 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 EDEM2Q9BV94 578 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 TTYH3Q9C0H2 523 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 MUC3BQ9H195 1237 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 FBRSQ9HAH7 460 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 TMEM51Q9NW97 253 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 AIPL1Q9NZN9 384 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 VPS28Q9UK41 221 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 PILRBQ9UKJ0 227 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 TBC1D30Q9Y2I9 924 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 SPTBN4Q9H254 2564 aa14.13□□□□□ -0.15
LTBR-202ENST00000440421 DMXL1Q9Y485 3027 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 TCRBV5S1A1TA0A578 114 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 LNP1A1A4G5 178 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 DCDC2BA2VCK2 349 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 ANKRD62A6NC57 917 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 DRGXA6NNA5 263 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 DNTTP04053 509 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 CFIP05156 583 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 VAV1P15498 845 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 MAOBP27338 520 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 OXTRP30559 389 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 ADRA1BP35368 520 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 HDAC4P56524 1084 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 RPL7AP62424 266 aaKnown RBP14.12□□□□□ -0.15
LTBR-202ENST00000440421 IRX4P78413 519 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 SULT2A1Q06520 285 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 KLHL30Q0D2K2 578 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 ARL13BQ3SXY8 428 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 TRIM61Q5EBN2 209 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 C9orf64Q5T6V5 341 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 STPG1Q5TH74 334 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 STRADAQ7RTN6 431 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 ZNF571Q7Z3V5 609 aaPredicted RBP14.12□□□□□ -0.15
LTBR-202ENST00000440421 RGL4Q8IZJ4 473 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 CCDC185Q8N715 623 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 KDM1BQ8NB78 822 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 CPLX3Q8WVH0 158 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 ZNF419Q96HQ0 510 aaPredicted RBP14.12□□□□□ -0.15
LTBR-202ENST00000440421 PPP1R9BQ96SB3 815 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 RTKNQ9BST9 563 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 NUP58Q9BVL2 599 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 MAGEB5Q9BZ81 275 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 RSPH9Q9H1X1 276 aaPredicted RBP14.12□□□□□ -0.15
LTBR-202ENST00000440421 IFNKQ9P0W0 207 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 SLC25A13Q9UJS0 675 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 OR51B4Q9Y5P0 310 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 ITIH6Q6UXX5 1313 aa14.12□□□□□ -0.15
LTBR-202ENST00000440421 IGLV3-10A0A075B6K4 115 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 EDDM13A0A1B0GTR0 161 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 TARSL2A2RTX5 802 aaKnown RBP14.11□□□□□ -0.15
LTBR-202ENST00000440421 MEI4A8MW99 385 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 SLC30A4O14863 429 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 CCP110O43303 1012 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 ATMINO43313 823 aaPredicted RBP14.11□□□□□ -0.15
LTBR-202ENST00000440421 IGLV3-19P01714 112 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 OR1E1P30953 314 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 PBX1P40424 430 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 PRKCIP41743 596 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 TTC31Q49AM3 519 aaPredicted RBP14.11□□□□□ -0.15
LTBR-202ENST00000440421 ACCSLQ4AC99 568 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 FIGNQ5HY92 759 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 SYCP2LQ5T4T6 812 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 ARTNQ5T4W7 220 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 ACBD5Q5T8D3 534 aaPredicted RBP14.11□□□□□ -0.15
LTBR-202ENST00000440421 SCYL2Q6P3W7 929 aa14.11□□□□□ -0.15
LTBR-202ENST00000440421 DCUN1D2Q6PH85 259 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms