RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ERICH1Q86X53 443 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 PPIL6Q8IXY8 311 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TOP6BLQ8N6T0 577 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 SLC4A11Q8NBS3 891 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 SPPL2BQ8TCT7 592 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 STK32AQ8WU08 396 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 EDAQ92838 391 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TNIP3Q96KP6 325 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 ASB16Q96NS5 453 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TBCBQ99426 244 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TUBB6Q9BUF5 446 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TRIM31Q9BZY9 425 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 CENPHQ9H3R5 247 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TBC1D17Q9HA65 648 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 PNPLA8Q9NP80 782 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TJP2Q9UDY2 1190 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 TSPAN16Q9UKR8 245 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 CDH9Q9ULB4 789 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 ARL2BPQ9Y2Y0 163 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 CAPN7Q9Y6W3 813 aa4.9□□□□□ -1.62
EDEM3-203ENST00000439962 GOLGA4Q13439 2230 aaKnown RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TM9SF1O15321 606 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ATMINO43313 823 aaPredicted RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 MSI1O43347 362 aaKnown RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 MGRN1O60291 552 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ZWINTO95229 277 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CYP11A1P05108 521 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 HNRNPA1P09651 372 aaKnown RBP eCLIP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 VDRP11473 427 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 HMGA1P17096 107 aaKnown RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CDKN2BP42772 138 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 MAGEA4P43358 317 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SEC24CP53992 1094 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ADIGQ0VDE8 80 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 IFT88Q13099 833 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 HTR4Q13639 388 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TFDP2Q14188 446 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 COL19A1Q14993 1142 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 PDK2Q15119 407 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 GALNTL6Q49A17 601 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SLC44A4Q53GD3 710 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ARHGAP15Q53QZ3 475 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 EFHC2Q5JST6 749 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 RNASEH2BQ5TBB1 312 aaKnown RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 PAQR9Q6ZVX9 377 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM150AQ86TG1 271 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ITIH5Q86UX2 942 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TMC8Q8IU68 726 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SCUBE3Q8IX30 993 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CMTM8Q8IZV2 173 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TMEM86AQ8N2M4 240 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CMASQ8NFW8 434 aaPredicted RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SH3RF2Q8TEC5 729 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CPA5Q8WXQ8 436 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TFAP2BQ92481 460 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 MAML1Q92585 1016 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SMARCD2Q92925 531 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 WBP2Q969T9 261 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 LRRC39Q96DD0 335 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 RTP4Q96DX8 246 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CHFRQ96EP1 664 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SMOQ99835 787 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 C11orf70Q9BRQ4 267 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 FBRSL1Q9HCM7 1045 aaKnown RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ARHGEF3Q9NR81 526 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 ASNSD1Q9NWL6 643 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 C2orf42Q9NWW7 574 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 MKS1Q9NXB0 559 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 GDAP2Q9NXN4 497 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 TRPM5Q9NZQ8 1165 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 PRKAG3Q9UGI9 489 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 SFMBT1Q9UHJ3 866 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 HCN4Q9Y3Q4 1203 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 FARP1Q9Y4F1 1045 aaPredicted RBP4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CPQQ9Y646 472 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 PIAS3Q9Y6X2 628 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 R4GN57 208 aa4.9□□□□□ -1.63
EDEM3-203ENST00000439962 CABIN1Q9Y6J0 2220 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 OTOGLQ3ZCN5 2332 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 A0A1W2PQH9 124 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TCRBV7S2A1N4TA0A589 114 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ARHGEF37A1IGU5 675 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 FAM47DPA6NHR8 397 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 APOC4-APOC2K7ER74 178 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ZNF197O14709 1029 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 GABRDO14764 452 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TSPAN3O60637 253 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 APOC2P02655 101 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 KRT1P04264 644 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PSMC3P17980 439 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 YWHAQP27348 245 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 HNRNPH1P31943 449 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SCTRP47872 440 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 ARL4CP56559 192 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 TAS2R40P59535 323 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 RPL10AP62906 217 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SLC25A11Q02978 314 aaKnown RBP4.89□□□□□ -1.63
EDEM3-203ENST00000439962 PDE4CQ08493 712 aa4.89□□□□□ -1.63
EDEM3-203ENST00000439962 SIGLEC14Q08ET2 396 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms