RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 H7C0C1 242 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 CYP17A1P05093 508 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 RBP3P10745 1247 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ETFBP38117 255 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ATP5OP48047 213 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 OXCT1P55809 520 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 SLC10A2Q12908 348 aaPredicted RBP21.24■□□□□ 0.99
CHD3-204ENST00000439235 BYSLQ13895 437 aaKnown RBP21.24■□□□□ 0.99
CHD3-204ENST00000439235 DHCR24Q15392 516 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ANO4Q32M45 955 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 PARP15Q460N3 678 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 LY6G5CQ5SRR4 150 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 AFMIDQ63HM1 303 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 RNF43Q68DV7 783 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ZNF783Q6ZMS7 281 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 TMEM25Q86YD3 366 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 LRRC49Q8IUZ0 686 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ARHGAP12Q8IWW6 846 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 KLHL7Q8IXQ5 586 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ASIC4Q96FT7 647 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 FAM118BQ9BPY3 351 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 FAM83CQ9BQN1 747 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 NDFIP2Q9NV92 336 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 TBC1D30Q9Y2I9 924 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 NUMBLQ9Y6R0 609 aa21.24■□□□□ 0.99
CHD3-204ENST00000439235 ILVBLA1L0T0 632 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 ARHGAP42A6NI28 874 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 NEDD8-MDP1E9PL57 170 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 DFFAO00273 331 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 RIOK3O14730 519 aaKnown RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 CHADO15335 359 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 ADH5P11766 374 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 COILP38432 576 aaPredicted RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 LMNB2Q03252 620 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 GAD2Q05329 585 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 SNX1Q13596 522 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 GRM2Q14416 872 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 POLD3Q15054 466 aaPredicted RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 CCDC137Q6PK04 289 aaKnown RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 ZC3H18Q86VM9 953 aaKnown RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 CPA6Q8N4T0 437 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 ATPAF2Q8N5M1 289 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 GRK7Q8WTQ7 553 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 BHMTQ93088 406 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 NXPE3Q969Y0 559 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 HDAC11Q96DB2 347 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 QKIQ96PU8 341 aaKnown RBP eCLIP21.23■□□□□ 0.994e-12■■■■■ 71
CHD3-204ENST00000439235 TRMT61BQ9BVS5 477 aaKnown RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 PLA2G2FQ9BZM2 168 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 SLC39A8Q9C0K1 460 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 DDX47Q9H0S4 455 aaKnown RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 MAGEH1Q9H213 219 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 FEZ2Q9UHY8 353 aaPredicted RBP21.23■□□□□ 0.99
CHD3-204ENST00000439235 DNPEPQ9ULA0 475 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 CDH23Q9H251 3354 aa21.23■□□□□ 0.99
CHD3-204ENST00000439235 CFAP69A5D8W1 941 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 RASA4BC9J798 803 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 HOXC11O43248 304 aaPredicted RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 RASA4O43374 803 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 MAP3K6O95382 1288 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 TYRP14679 529 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 GARSP41250 739 aaKnown RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 GNA12Q03113 381 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 NR1H3Q13133 447 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 SLC45A4Q5BKX6 768 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 TRIM68Q6AZZ1 485 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 DARS2Q6PI48 645 aaKnown RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 RHBDF2Q6PJF5 856 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 CCDC105Q8IYK2 499 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 MMGT1Q8N4V1 131 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 ST13P5Q8NFI4 369 aaPredicted RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 TFB1MQ8WVM0 346 aaKnown RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 ZFYVE19Q96K21 471 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 CCDC114Q96M63 670 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 KRT12Q99456 494 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 FERMT1Q9BQL6 677 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 EBF3Q9H4W6 596 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 NOL6Q9H6R4 1146 aaKnown RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 PLK2Q9NYY3 685 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 ZNF148Q9UQR1 794 aa21.22■□□□□ 0.99
CHD3-204ENST00000439235 DRG1Q9Y295 367 aaKnown RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 KIF26AQ9ULI4 1882 aaPredicted RBP21.22■□□□□ 0.99
CHD3-204ENST00000439235 BCLAF3A2AJT9 711 aaKnown RBP21.21■□□□□ 0.99
CHD3-204ENST00000439235 ITGAVP06756 1048 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 ARSAP15289 507 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 GDI1P31150 447 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 TUBB4BP68371 445 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 ZNF33AQ06730 810 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 PPIDQ08752 370 aaKnown RBP21.21■□□□□ 0.99
CHD3-204ENST00000439235 OASLQ15646 514 aaKnown RBP21.21■□□□□ 0.99
CHD3-204ENST00000439235 CXorf57Q6NSI4 855 aaKnown RBP21.21■□□□□ 0.99
CHD3-204ENST00000439235 TTC27Q6P3X3 843 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.21■□□□□ 0.99
CHD3-204ENST00000439235 CCNYQ8ND76 341 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 ATL2Q8NHH9 583 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 CCDC26Q8TAB7 109 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 FIBINQ8TAL6 211 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 HMCESQ96FZ2 354 aa21.21■□□□□ 0.99
CHD3-204ENST00000439235 XPO6Q96QU8 1125 aaKnown RBP21.21■□□□□ 0.99
CHD3-204ENST00000439235 SLC2A11Q9BYW1 496 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms