RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 TAS2R13Q9NYV9 303 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 SLC27A6Q9Y2P4 619 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 CICQ96RK0 1608 aaPredicted RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 A0A1W2PQ45 241 aaPredicted RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 A0A1W2PQY0 241 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 MAGEB16A2A368 324 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 HS6ST1O60243 411 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 PRMT3O60678 531 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ZNF135P52742 658 aaPredicted RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 FAAH2Q6GMR7 532 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 C11orf63Q6NUN7 778 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 KLHL35Q6PF15 583 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 DIS3LQ8TF46 1054 aaKnown RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 AUTS2Q8WXX7 1259 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ARMC7Q9H6L4 198 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 FAF1Q9UNN5 650 aaPredicted RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 AIM2O14862 343 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 MDM4O15151 490 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 BUD23O43709 281 aaKnown RBP12.33□□□□□ -0.44
NEK1-201ENST00000439128 SLC35G4P0C7Q5 338 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 GDI1P31150 447 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 SP2Q02086 613 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 PLA2G4EQ3MJ16 856 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 OLFML2BQ68BL8 750 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 LRRC52Q8N7C0 313 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 TC2NQ8N9U0 490 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ZSWIM2Q8NEG5 633 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 TNIP2Q8NFZ5 429 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 ACTL9Q8TC94 416 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 PRKD2Q9BZL6 878 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 BLOC1S4Q9NUP1 217 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 CLIC5Q9NZA1 410 aa12.33□□□□□ -0.44
NEK1-201ENST00000439128 TRBV23OR9-2A0A075B6M9 112 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 MAGEC1O60732 1142 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 RPA3P35244 121 aaPredicted RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 SERPINH1P50454 418 aaKnown RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 CBWD6Q4V339 395 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 LVRNQ6Q4G3 990 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 E2F7Q96AV8 911 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 NAT9Q9BTE0 207 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 DCDC2Q9UHG0 476 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 DNPEPQ9ULA0 475 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 ACOT9Q9Y305 439 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 DERAQ9Y315 318 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 SYN3O14994 580 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 VAPBO95292 243 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 TCN1P20061 433 aaPredicted RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 CYP4F8P98187 520 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 USP4Q13107 963 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 ZNF470Q6ECI4 717 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 HIBCHQ6NVY1 386 aaPredicted RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 BBS7Q8IWZ6 715 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 CATSPERZQ9NTU4 200 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 ARL15Q9NXU5 204 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 PCDHGA4Q9Y5G9 962 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 MRC1P22897 1456 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 WDR27A2RRH5 827 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 TCP11X1B4DZS4 312 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 TSPAN1O60635 241 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 GLRA3O75311 464 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 AGTP01019 485 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 KRT6AP02538 564 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 CATP04040 527 aaKnown RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 KRT6BP04259 564 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 PCCBP05166 539 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 MGAT1P26572 445 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 KRT6CP48668 564 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 PMS1P54277 932 aaKnown RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 TAF8Q7Z7C8 310 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 ARL14EPQ8N8R7 260 aaPredicted RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 CARD9Q9H257 536 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 MROH1Q8NDA8 1641 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 TPBGLP0DKB5 382 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 PBX3P40426 434 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 ATAD3BQ5T9A4 648 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 KCNT2Q6UVM3 1135 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 VSTM1Q6UX27 236 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 GPR135Q8IZ08 494 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 COL26A1Q96A83 441 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 GABRQQ9UN88 632 aa12.32□□□□□ -0.44
NEK1-201ENST00000439128 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.32□□□□□ -0.44
NEK1-201ENST00000439128 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 ATP5HO75947 161 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 SLC25A14O95258 325 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 SLC2A4P14672 509 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 TKTP29401 623 aaKnown RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 GAD2Q05329 585 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 SPIDRQ14159 915 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 GDF6Q6KF10 455 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.31□□□□□ -0.44
NEK1-201ENST00000439128 KCNMB4Q86W47 210 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 LRRC6Q86X45 466 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 PHYKPLQ8IUZ5 450 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 OR5B17Q8NGF7 314 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 NPLOC4Q8TAT6 608 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 KCNB2Q92953 911 aa12.31□□□□□ -0.44
NEK1-201ENST00000439128 AGO1Q9UL18 857 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms